Alligator_sinensis_CCG006419.1 (Alligator sinensis)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02008 (zf-CXXC) IPR002857 Alligator_sinensis_CCG006419.1 T168565_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FBXL19
M01916_2.00 		Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN		 PBM
Weirauch et al.(2014)
pTH8570 		0.936 0.936
A6H8I1_DANRE
M01906_2.00 		Danio rerio
CGTACGYA
TRCGTACG		 PBM
Weirauch et al.(2014)
pTH9257 		0.894 0.894
KDM2B
M01911_2.00 		Homo sapiens
NNNNNNCGN
NCGNNNNNN		 PBM
Weirauch et al.(2014)
pTH9191 		0.894 0.894
kdm2ba
M01909_2.00 		Danio rerio
NNNNCGN
NCGNNNN		 PBM
Weirauch et al.(2014)
pTH8577 		0.872 0.872
KDM2A
M01915_2.00 		Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH9212 		0.787 0.787
kdm2aa
M01910_2.00 		Danio rerio
NCGNNNNNN
NNNNNNCGN		 PBM
Weirauch et al.(2014)
pTH8585 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG006419.1 CxxC 10 56

Links

Other CxxC family TFs
Other Alligator sinensis TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CG8765 Drosophila melanogaster FBgn0036900 D
GA21303 Drosophila pseudoobscura FBgn0081291 I
GF10717 Drosophila ananassae FBgn0087758 I
GG13380 Drosophila erecta FBgn0105652 I
GH14617 Drosophila grimshawi FBgn0122093 N
GI13504 Drosophila mojavensis FBgn0136259 N
GL20873 Drosophila persimilis FBgn0158468 I
GM16842 Drosophila sechellia FBgn0171755 I
GJ11865 Drosophila virilis FBgn0199119 N
GK25760 Drosophila willistoni FBgn0227719 I
GE22473 Drosophila yakuba FBgn0239693 I
LCUP001542 Lucilia cuprina LCUP001542 N
MDOA007247 Musca domestica MDOA007247 N