CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g08193
(
Acanthocheilonema viteae
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
nAv.1.0.1.g08193
T168820_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y75B8A.6
M00652_2.00
Caenorhabditis elegans
NHKCGGD
HCCGMDN
PBM
Narasimhan et al.(2015)
pTH10798
0.871
0.871
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t08193-RA
CxxC
74
120
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
nAv.1.0.1.t08193-RA
CxxC
134
179
TFKARVGCNQCEDCRMPDCQICLVCLDKRFFDNRYMTGAMCAKKRC
Links
Other
CxxC
family TFs
Other
Acanthocheilonema viteae
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000128854
Malus domestica
MDP0000128854
N
MDP0000303022
Malus domestica
MDP0000303022
N
Pm013320
Prunus mume
Pm013320
N
PRUPE_ppa006690mg
Prunus persica
PRUPE_ppa006690mg
N
PRUPE_ppa007317mg
Prunus persica
PRUPE_ppa007317mg
N
PRUPE_ppa018041mg
Prunus persica
PRUPE_ppa018041mg
N