CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_1815200
(
Strongyloides venezuelensis
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
SVE_1815200
T168840_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y75B8A.6
M00652_2.00
Caenorhabditis elegans
NHKCGGD
HCCGMDN
PBM
Narasimhan et al.(2015)
pTH10798
0.785
0.785
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_1815200.1
CxxC
179
225
TAMNRSQRCGICRGCQCKPCGHCTYCQDSPQFGGPGVKKQSCIERRC
SVE_1815200.1
CxxC
239
284
TFKARLGCNNCDDCRLADCQVCLVCLDKRFFDNKYMTGALCAKKRC
Links
Other
CxxC
family TFs
Other
Strongyloides venezuelensis
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_07586
Capronia coronata
A1O1_07586
N
A1O3_06292
Capronia epimyces
A1O3_06292
I
A1O7_01468
Cladophialophora yegresii
A1O7_01468
N
fgenesh1_pm.00153_#_158
Aspergillus carbonarius
fgenesh1_pm.00153_#_158
I
G647_01537
Cladophialophora carrionii
G647_01537
N
PV05_03926
Exophiala xenobiotica
PV05_03926
N
PV11_05497
Exophiala sideris
PV11_05497
N
SPBR_02468
Sporothrix brasiliensis
SPBR_02468
N
TRIATDRAFT_34766
Trichoderma atroviride
TRIATDRAFT_34766
N