CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE05176
(
Caenorhabditis remanei
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00751 (DM)
IPR001275
CRE05176
T168935_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mab-3
M00653_2.00
Caenorhabditis elegans
NWTGTTGCRN
NYGCAACAWN
PBM
Narasimhan et al.(2015)
pTH8998
0.949
0.903
mab-3
M07546_2.00
Caenorhabditis elegans
AATGTTGCSWWNT
ANWWSGCAACATT
EMSA
Mathelier et al.(2014)
MA0262.1
0.949
0.903
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE05176
DM
24
69
KNYYCQRCLNHGEYKPRKGHKPDCRYLQCPCAECTMVERRRQLNNM
CRE05176
DM
90
137
RDPHCARCSAHGVLVPLRGHKRTMCQFVTCTCTLCALVENRRMLMAAQ
Links
Other
DM
family TFs
Other
Caenorhabditis remanei
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_03180
Beauveria bassiana
BBA_03180
N
CFIO01_06836
Colletotrichum fioriniae
CFIO01_06836
N
Cob_11092
Colletotrichum orbiculare
Cob_11092
N
CSUB01_09286
Colletotrichum sublineola
CSUB01_09286
N
estExt_fgenesh1_pm.C_sca_2_chr3_3_00071
Nectria haematococca
estExt_fgenesh1_pm.C_sca_2_chr3_3_00071
N
FOXG_03505
Fusarium oxysporum
FOXG_03505
N
FVEG_02371
Fusarium verticillioides
FVEG_02371
N
GLRG_06557
Colletotrichum graminicola
GLRG_06557
N
MAC_06654
Metarhizium acridum
MAC_06654
N
MAM_00381
Metarhizium album
MAM_00381
N
MANI_025227
Metarhizium anisopliae
MANI_025227
N
MBR_06926
Metarhizium brunneum
MBR_06926
N
MGU_05340
Metarhizium guizhouense
MGU_05340
N
NechaG103657
Fusarium solani
NechaG103657
N
TRIATDRAFT_219643
Trichoderma atroviride
TRIATDRAFT_219643
N
TRIREDRAFT_111013
Trichoderma reesei
TRIREDRAFT_111013
N
TRIVIDRAFT_115781
Trichoderma virens
TRIVIDRAFT_115781
N
VHEMI06572
Torrubiella hemipterigena
VHEMI06572
N
X797_008514
Metarhizium robertsii
X797_008514
N