dmrta2 (Xenopus tropicalis)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 XB-GENE-997963 T169562_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dmrta2
M01937_2.00		 Xenopus tropicalis
NNWDWDDN
NHHWHWNN		 PBM
Weirauch et al.(2014)
pTH9300		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DMRTA2
M01930_2.00 		Homo sapiens
NNHDTDDNNN
NNNHHAHDNN		 PBM
Weirauch et al.(2014)
pTH9198 		0.965 0.979
DMRTA2
M04692_2.00 		Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX 		0.965 0.979
DMRTA2
M10433_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT5_01 		0.965 0.979
DMRTA2
M04693_2.00 		Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX 		0.965 0.979
dmrt99B
M01935_2.00 		Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW		 PBM
Weirauch et al.(2014)
pTH9261 		0.965 0.957
dmrt99B
M01211_2.00 		Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN		 PBM
Lambert et al.(2019)
pTH9799 		0.965 0.957
dmrt99B
M03720_2.00 		Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND		 SELEX
Nitta et al.(2015)
dmrt99B_1 		0.965 0.957
dmd-5
M00659_2.00 		Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW		 PBM
Narasimhan et al.(2015)
pTH10777 		0.956 0.936
Dmrt1
M09027_2.00 		Mus musculus
HDGHWACAAWGTWDCHN
NDGHWACWTTGTWDCHD		 Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C 		0.934 0.787
DMRT2
M01931_2.00 		Homo sapiens
NAATKTATHN
NDATAMATTN		 PBM
Weirauch et al.(2014)
pTH9189 		0.934 0.830
DMRT2
M10434_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT2_01 		0.934 0.830
DMRT1
M01928_2.00 		Homo sapiens
NDWGTWDCNN
NNGHWACWHN		 PBM
Weirauch et al.(2014)
pTH9197 		0.933 0.787
DMRT1
M01929_2.00 		Homo sapiens
TGTATCAA
TTGATACA		 PBM
Weirauch et al.(2014)
pTH9446 		0.933 0.787
DMRT1
M04683_2.00 		Homo sapiens
NWTGTWDCVWHN
NDWBGHWACAWN		 SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX 		0.933 0.787
DMRT1
M10431_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT1_01 		0.933 0.787
DMRT1
M04684_2.00 		Homo sapiens
NDYGTWDCVNNN
NNNBGHWACRHN		 SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX 		0.933 0.787
DMRT3
M01927_2.00 		Homo sapiens
NWTGTAWCMNN
NNKGWTACAWN		 PBM
Weirauch et al.(2014)
pTH9188 		0.932 0.851
DMRT3
M04681_2.00 		Homo sapiens
AWTGTAWCAAWWH
DWWTTGWTACAWT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX 		0.932 0.851
DMRT3
M10430_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT3_01 		0.932 0.851
DMRT3
M04682_2.00 		Homo sapiens
AATGTAWCRAWWY
RWWTYGWTACATT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX 		0.932 0.851
dmd-4
M00656_2.00 		Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN		 PBM
Narasimhan et al.(2015)
pTH10640 		0.930 0.787
dmrt93B
M03718_2.00 		Drosophila melanogaster
NDTGTATCRWW
WWYGATACAHN		 SELEX
Nitta et al.(2015)
dmrt93B_1 		0.900 0.702
dmrt93B
M03719_2.00 		Drosophila melanogaster
NNHGTAWCNNN
NNNGWTACDNN		 SELEX
Nitta et al.(2015)
dmrt93B_2 		0.900 0.702
Dmrtb1
M09028_2.00 		Mus musculus
DGHWACAMWGTWDCHV
BDGHWACWKTGTWDCH		 Misc
Kulakovskiy et al.(2013)
DMRTB_MOUSE.H11MO.0.C 		0.877 0.638
ENSMODG00000010059
M01932_2.00 		Monodelphis domestica
NDWGTWDHNN
NNDHWACWHN		 PBM
Weirauch et al.(2014)
pTH9215 		0.876 0.638
Dmrtc2
M00789_2.00 		Mus musculus
NNNATGTATHMNN
NNKDATACATNNN		 PBM
Weirauch et al.(2013)
pTH3205 		0.874 0.681
DMRTC2
M04685_2.00 		Homo sapiens
TGTAWCRTTB
VAAYGWTACA		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_1 		0.874 0.681
DMRTC2
M04686_2.00 		Homo sapiens
NWTGTADCAAWW
WWTTGHTACAWN		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_2 		0.874 0.681
DMRTC2
M04688_2.00 		Homo sapiens
TGTATCGTTC
GAACGATACA		 SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_1 		0.874 0.681
DMRTC2
M04689_2.00 		Homo sapiens
NDTGTRKCAAWH
DWTTGMYACAHN		 SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_2 		0.874 0.681
DMRTC2
M10432_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT7_01 		0.874 0.681
DMRTC2
M04687_2.00 		Homo sapiens
NATGTAKCRAWW
WWTYGMTACATN		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_Methyl-HT-SELEX 		0.874 0.681
DMRTC2
M04690_2.00 		Homo sapiens
YGTATCGTTY
RAACGATACR		 SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_1 		0.874 0.681
DMRTC2
M04691_2.00 		Homo sapiens
NRTGTRKCRAWW
WWTYGMYACAYN		 SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_2 		0.874 0.681
DMRTC2
M01926_2.00 		Cavia porcellus
NNHDWNDN
NHNWHDNN		 PBM
Weirauch et al.(2014)
pTH9250 		0.873 0.660
ENSOANG00000013938
M01933_2.00 		Ornithorhynchus anatinus
NNWGTWDNNN
NNNHWACWNN		 PBM
Weirauch et al.(2014)
pTH9271 		0.860 0.638
dsx
M06183_2.00 		Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA		 B1H
Zhu et al.(2011)
dsx-F_FlyReg_FBgn0000504 		0.859 0.638
dsx
M06184_2.00 		Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA		 B1H
Zhu et al.(2011)
dsx-M_FlyReg_FBgn0000504 		0.859 0.638
For this family, TFs with SR scores > 0.845 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01937_2.00 DM 31 77

DNA Binding Domains

Protein ID Domain From To Sequence
A4QNP7 DM 45 91
AAI36033 DM 45 91

Links

Other DM family TFs
Other Xenopus tropicalis TFs

654 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010226 Aedes aegypti AAEL010226 I 0.000
AALB001175 Anopheles albimanus AALB001175 I 0.000
AARA010786 Anopheles arabiensis AARA010786 I 0.000
ACEP22357 Atta cephalotes ACEP22357 I 0.000
ACOM039284 Anopheles coluzzii ACOM039284 I 0.000
ACUA015759 Anopheles culicifacies ACUA015759 I 0.000
ACYPI003796 Acyrthosiphon pisum ACYPI003796 I 0.000
ADAC004782 Anopheles darlingi ADAC004782 I 0.000
ADIR011358 Anopheles dirus ADIR011358 I 0.000
AEPI010093 Anopheles epiroticus AEPI010093 I 0.000
AFUN010901 Anopheles funestus AFUN010901 I 0.000
AGAP008814 Anopheles gambiae AGAP008814 I 0.000
AMAM016616 Anopheles maculatus AMAM016616 I 0.000
AMEC022127 Anopheles melas AMEC022127 I 0.000
AMEM007225 Anopheles merus AMEM007225 I 0.000
AMIN007190 Anopheles minimus AMIN007190 I 0.000
AQUA004188 Anopheles quadriannulatus AQUA004188 I 0.000
ASTEI05038 Anopheles stephensi ASTEI05038 I 0.000
BGIBMGA003285 Bombyx mori BGIBMGA003285 I 0.000
Cflo_06641--XP_394032.3_APIME Camponotus floridanus Cflo_06641--XP_394032.3_APIME I 0.000
CLEC011986 Cimex lectularius CLEC011986 I 0.000
CPIJ006828 Culex quinquefasciatus CPIJ006828 I 0.000
CpipJ_CPIJ006828 Culex pipiens CpipJ_CPIJ006828 I 0.000
DAPPUDRAFT_299735 Daphnia pulex DAPPUDRAFT_299735 I 0.000
da Drosophila melanogaster FBgn0000413 D 0.000
GA18660 Drosophila pseudoobscura FBgn0078660 I 0.000
GF15779 Drosophila ananassae FBgn0092803 I 0.000
GG10122 Drosophila erecta FBgn0102433 I 0.000
GH13857 Drosophila grimshawi FBgn0121333 I 0.000
GI19105 Drosophila mojavensis FBgn0141844 I 0.000
GM18305 Drosophila sechellia FBgn0173212 I 0.000
GD23692 Drosophila simulans FBgn0195069 I 0.000
GJ15409 Drosophila virilis FBgn0202603 I 0.000
GK12476 Drosophila willistoni FBgn0214486 I 0.000
GE18936 Drosophila yakuba FBgn0236308 I 0.000
GB41727 Apis mellifera GB41727 I 0.000
Hsal_01424--XP_394032.3_APIME Harpegnathos saltator Hsal_01424--XP_394032.3_APIME I 0.000
KGM_13328 Danaus plexippus KGM_13328 I 0.000
L798_13597 Zootermopsis nevadensis L798_13597 I 0.000
LCUP014805 Lucilia cuprina LCUP014805 I 0.000
LCUP015675 Lucilia cuprina LCUP015675 I 0.000
LDEC016095 Leptinotarsa decemlineata LDEC016095 I 0.000
LLOJ002325 Lutzomyia longipalpis LLOJ002325 I 0.000
MDOA011656 Musca domestica MDOA011656 I 0.000
MESCA003205 Megaselia scalaris MESCA003205 I 0.000
NV16928 Nasonia vitripennis NV16928 I 0.000
PHUM374400 Pediculus humanus PHUM374400 I 0.000
SINV15659 Solenopsis invicta SINV15659 I 0.000
TC009743 Tribolium castaneum TC009743 I 0.000
YQE_12444 Dendroctonus ponderosae YQE_12444 I 0.000