CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
HPLM_0001799301
(
Haemonchus placei
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
HPLM_0001799301
T169840_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mab-3
M00653_2.00
Caenorhabditis elegans
NWTGTTGCRN
NYGCAACAWN
PBM
Narasimhan et al.(2015)
pTH8998
0.856
0.677
mab-3
M07546_2.00
Caenorhabditis elegans
AATGTTGCSWWNT
ANWWSGCAACATT
EMSA
Mathelier et al.(2014)
MA0262.1
0.856
0.677
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0001799301-mRNA-1
DM
5
50
KKYFCQRCLNHDLQFPRKGHKPVCKYANCTCSDCIMVEQRRQLNNM
HPLM_0001799301-mRNA-1
DM
70
117
RDPQCARCRQHGIRVPLRGHKRVLCQFANCKCEMCELVEDRRSLMAKQ
Links
Other
DM
family TFs
Other
Haemonchus placei
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_05136
Capronia epimyces
A1O3_05136
N
CMQ_7325
Grosmannia clavigera
CMQ_7325
N
HMPREF1624_02647
Sporothrix schenckii
HMPREF1624_02647
N
PV04_01600
Capronia semiimmersa
PV04_01600
N
PV07_04827
Cladophialophora immunda
PV07_04827
N
PV10_00419
Exophiala mesophila
PV10_00419
N
PVAR5_8893
Byssochlamys spectabilis
PVAR5_8893
N
SPBR_02412
Sporothrix brasiliensis
SPBR_02412
N