CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1062s0030
(
Capsella grandiflora
)
Dof
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02701 (zf-Dof)
IPR003851
Cagra.1062s0030
T171656_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1062s0030.1.p
Dof
20
78
PPHRVCPRCNSNNTKFCYFNNYRKSQPRYNCKNCRRHWTHGGALRNVPIGGGSHKIKKA
Cagra.1062s0030.1.p
Dof
132
178
FPDLYGDNTKFCYYNISSLSDPRCSARIVIKYMTRGGHFTTYRSVEA
Links
Other
Dof
family TFs
Other
Capsella grandiflora
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10007153m.g
Capsella rubella
Carubv10007153m.g
I
0.534
Carubv10019341m.g
Capsella rubella
Carubv10019341m.g
I
0.544