CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
E2F8
(
Cavia porcellus
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
ENSCPOG00000013766
T172513_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.985
0.985
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.985
0.985
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.985
0.985
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.794
0.794
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.794
0.794
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.794
0.794
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.794
0.794
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.794
0.794
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.794
0.794
E2FE
M01958_2.00
Arabidopsis thaliana
HDSGCGCSHD
HDSGCGCSHD
PBM
Weirauch et al.(2014)
pTH8176
0.581
0.581
E2FE
M06873_2.00
Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN
NHHNWNWWTTTCCCGCCAAAA
Dap-seq
OMalley et al.(2016)
DEL1_col_a
0.581
0.581
E2FE
M06874_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL1_colamp_a
0.581
0.581
E2FD
M06875_2.00
Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW
WTTTCCCGCCAAAAHHDWWH
Dap-seq
OMalley et al.(2016)
DEL2_col_a
0.493
0.493
E2FD
M06876_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL2_colamp_a
0.493
0.493
E2FD
M10442_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$E2L1_Q2
0.493
0.493
E2FD
M10443_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$E2L_Q2
0.493
0.493
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000012402
E2F
106
174
KEKSLGLLCHKFLARYPKYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESLHMVSRLAKNRYTWHG
ENSCPOP00000012402
E2F
254
339
KDKSLRVMSQKFVMLFLVSTPQIVSLEIAAKILIGEDHVEDLDKSKFKTKIRRLYDIANVLSSLDLIKKVHVTEERGRKPAFKWTG
Links
Other
E2F
family TFs
Other
Cavia porcellus
TFs
360 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF239
Bos taurus
ENSBTAG00000019039
N
ZNF239
Canis familiaris
ENSCAFG00000031910
N
ZNF239
Callithrix jacchus
ENSCJAG00000016278
N
ENSCSAG00000018415
Chlorocebus sabaeus
ENSCSAG00000018415
N
ZNF239
Dasypus novemcinctus
ENSDNOG00000004406
N
ZNF239
Equus caballus
ENSECAG00000003179
N
ZNF239
Felis catus
ENSFCAG00000023538
N
ZNF239
Homo sapiens
ENSG00000196793
N
ZNF239
Gorilla gorilla
ENSGGOG00000001913
N
ENSMMUG00000022433
Macaca mulatta
ENSMMUG00000022433
N
ENSMPUG00000020136
Mustela putorius furo
ENSMPUG00000020136
N
ENSNLEG00000015896
Nomascus leucogenys
ENSNLEG00000015896
N
ENSOARG00000003720
Ovis aries
ENSOARG00000003720
N
ZNF239
Oryctolagus cuniculus
ENSOCUG00000010992
N
ENSP00000341689
Macaca fascicularis
ENSP00000341689
N
ENSPANG00000022661
Papio anubis
ENSPANG00000022661
N
ZNF239
Procavia capensis
ENSPCAG00000006595
N
ENSPPYG00000002214
Pongo abelii
ENSPPYG00000002214
N
ZNF239
Pan troglodytes
ENSPTRG00000022725
N
ZNF239
Sus scrofa
ENSSSCG00000029576
N
ENSTSYG00000004834
Tarsius syrichta
ENSTSYG00000004834
N
ZNF239
Vicugna pacos
ENSVPAG00000012405
N