CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSETEG00000000218
(
Echinops telfairi
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
ENSETEG00000000218
T172582_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E2f5
M09042_2.00
Mus musculus
NGCGCSAAAN
NTTTSGCGCN
Misc
Kulakovskiy et al.(2013)
E2F5_MOUSE.H11MO.0.B
0.714
0.714
E2F4
M02961_2.00
Homo sapiens
AATGGCGCCAAA
TTTGGCGCCATT
SELEX
Jolma et al.(2013)
E2F4_1
0.686
0.686
E2F4
M02962_2.00
Homo sapiens
TTTGGCGCCAAA
TTTGGCGCCAAA
SELEX
Jolma et al.(2013)
E2F4_2
0.686
0.686
E2F4
M04707_2.00
Homo sapiens
NWWKGGCGCCAAAW
WTTTGGCGCCMWWN
SELEX
Yin et al.(2017)
E2F4_eDBD_HT-SELEX
0.686
0.686
E2F4
M08109_2.00
Homo sapiens
NSGCGGGARVN
NBYTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA0470.1
0.686
0.686
E2F4
M07942_2.00
Homo sapiens
SGCGSGARDNNBNVN
NBNVNNHYTCSCGCS
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F4_UCD
0.686
0.686
E2F4
M07943_2.00
Homo sapiens
SGCGGGARDNNBVVN
NBBVNNHYTCCCGCS
ChIP-seq
Gerstein et al.(2012)
K562b_E2F4_UCD
0.686
0.686
E2F4
M09036_2.00
Homo sapiens
VDRGGCGGGRVND
HNBYCCCGCCYHB
Misc
Kulakovskiy et al.(2013)
E2F4_HUMAN.H11MO.0.A
0.686
0.686
E2f4
M09037_2.00
Mus musculus
NRDDGGCGGGRMNN
NNKYCCCGCCHHYN
Misc
Kulakovskiy et al.(2013)
E2F4_MOUSE.H11MO.0.A
0.686
0.686
E2F4
M09524_2.00
Homo sapiens
VGCGSGAADH
DHTTCSCGCB
Misc
Heinz et al.(2010)
K562-E2F4_GSE31477
0.686
0.686
E2F4
M10457_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_05
0.686
0.686
E2F4
M10458_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q3
0.686
0.686
E2F4
M10459_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q6
0.686
0.686
e_gw1.38.2.1
M01968_2.00
Physcomitrella patens
NSGCGCBHHN
NDDVGCGCSN
PBM
Weirauch et al.(2014)
pTH5707
0.600
0.600
estExt_gwp_gw1.C_220046
M01225_2.00
Physcomitrella patens
VGCGCBHHNN
NNDDVGCGCB
PBM
Lambert et al.(2019)
pTH9809
0.600
0.600
E2FA
M06871_2.00
Arabidopsis thaliana
NDDDGGCGCCAWWW
WWWTGGCGCCHHHN
Dap-seq
OMalley et al.(2016)
E2FA_col_a
0.600
0.600
E2FA
M06872_2.00
Arabidopsis thaliana
DDWDGGCGCCAWAD
HTWTGGCGCCHWHH
Dap-seq
OMalley et al.(2016)
E2FA_colamp_a
0.600
0.600
E2FA
M08106_2.00
Arabidopsis thaliana
NVGCGCCAHN
NDTGGCGCBN
ChIP-seq
Mathelier et al.(2014)
MA1414.1
0.600
0.600
ENSACAG00000013716
M01960_2.00
Anolis carolinensis
HNVGCGCBND
HNVGCGCBND
PBM
Weirauch et al.(2014)
pTH9221
0.571
0.571
E2F2
M01961_2.00
Homo sapiens
DNSGCGCSNH
DNSGCGCSNH
PBM
Weirauch et al.(2014)
pTH9195
0.571
0.571
E2f2
M00154_2.00
Mus musculus
NDNNGCGSBN
NVSCGCNNHN
PBM
Badis et al.(2009)
E2F2_1022
0.571
0.571
ENSOANG00000014967
M01962_2.00
Ornithorhynchus anatinus
NDSGCGCSHN
NDSGCGCSHN
PBM
Weirauch et al.(2014)
pTH9382
0.571
0.571
E2F2
M01963_2.00
Tupaia belangeri
WDVGCGCBHW
WDVGCGCBHW
PBM
Weirauch et al.(2014)
pTH9291
0.571
0.571
E2F3
M01964_2.00
Taeniopygia guttata
NNSGCGCGMN
NKCGCGCSNN
PBM
Weirauch et al.(2014)
pTH9288
0.571
0.571
E2F1
M02952_2.00
Homo sapiens
WWDGGCGCCAAW
WTTGGCGCCHWW
SELEX
Jolma et al.(2013)
E2F1_1
0.571
0.571
E2F1
M02953_2.00
Homo sapiens
WWKGGCGCCWWW
WWWGGCGCCMWW
SELEX
Jolma et al.(2013)
E2F1_2
0.571
0.571
E2F1
M02954_2.00
Homo sapiens
WWWKGGCGCCMWWW
WWWKGGCGCCMWWW
SELEX
Jolma et al.(2013)
E2F1_3
0.571
0.571
E2F1
M02955_2.00
Homo sapiens
AAWKGGCGCCAWTW
WAWTGGCGCCMWTT
SELEX
Jolma et al.(2013)
E2F1_4
0.571
0.571
E2F2
M02949_2.00
Homo sapiens
AAAAATGGCGCCAAAAWD
HWTTTTGGCGCCATTTTT
SELEX
Jolma et al.(2013)
E2F2_1
0.571
0.571
E2F2
M02950_2.00
Homo sapiens
VDTTTTGGCGCCAAAAHN
NDTTTTGGCGCCAAAAHB
SELEX
Jolma et al.(2013)
E2F2_2
0.571
0.571
E2F2
M02951_2.00
Homo sapiens
AAAWWGGCGCCAWTTT
AAAWTGGCGCCWWTTT
SELEX
Jolma et al.(2013)
E2F2_3
0.571
0.571
E2F1
M04700_2.00
Homo sapiens
NWWWDGGCGCCAAAWH
DWTTTGGCGCCHWWWN
SELEX
Yin et al.(2017)
E2F1_FL_HT-SELEX
0.571
0.571
E2F2
M04696_2.00
Homo sapiens
GCGCGCGCSYW
WRSGCGCGCGC
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_1
0.571
0.571
E2F2
M04697_2.00
Homo sapiens
NDWWDGGCGCCWWHWN
NWDWWGGCGCCHWWHN
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_2
0.571
0.571
efl-1
M08110_2.00
Caenorhabditis elegans
HNHNSGCGSSAAWWN
NWWTTSSCGCSNDND
ChIP-seq
Mathelier et al.(2014)
MA0541.1
0.571
0.571
E2F1
M07938_2.00
Homo sapiens
VRRVNRVGCGSGMDS
SHKCSCGCBYNBYYB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F1_UCD
0.571
0.571
efl-1
M08197_2.00
Caenorhabditis elegans
BGCGSSAAWW
WWTTSSCGCV
ChIP-seq
Contrino et al.(2012)
Mw140
0.571
0.571
E2F1
M09030_2.00
Homo sapiens
NVNDGGCGGGARVN
NBYTCCCGCCHNBN
Misc
Kulakovskiy et al.(2013)
E2F1_HUMAN.H11MO.0.A
0.571
0.571
E2F2
M09029_2.00
Homo sapiens
GGCGCGMAWC
GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_HUMAN.H11MO.0.B
0.571
0.571
E2f1
M09041_2.00
Mus musculus
NDDGGCGGGRVN
NBYCCCGCCHHN
Misc
Kulakovskiy et al.(2013)
E2F1_MOUSE.H11MO.0.A
0.571
0.571
E2f2
M09039_2.00
Mus musculus
GGCGCGMAWC
GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_MOUSE.H11MO.0.B
0.571
0.571
efl-1
M09526_2.00
Caenorhabditis elegans
WGCAARYGCGCTCYA
TRGAGCGCRYTTGCW
Misc
Heinz et al.(2010)
cElegans-L1-EFL1_modEncode
0.571
0.571
E2F1
M09521_2.00
Homo sapiens
NNGGCGGGAA
TTCCCGCCNN
Misc
Heinz et al.(2010)
Hela-E2F1_GSE22478
0.571
0.571
E2F1
M10444_2.00
Homo sapiens
THVGCGCGAAAAHKR
YMDTTTTCGCGCBDA
Transfac
Matys et al.(2006)
V$E2F_01
0.571
0.571
E2F1
M10445_2.00
Homo sapiens
BHKSGCGCSAAA
TTTSGCGCSMDV
Transfac
Matys et al.(2006)
V$E2F_03
0.571
0.571
E2F1
M10446_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_01
0.571
0.571
E2F1
M10447_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_02
0.571
0.571
E2F1
M10448_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3_01
0.571
0.571
E2F1
M10449_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3
0.571
0.571
E2F1
M10450_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_01
0.571
0.571
E2F1
M10451_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_02
0.571
0.571
E2F1
M10452_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4
0.571
0.571
E2F1
M10453_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6
0.571
0.571
E2F2
M04698_2.00
Homo sapiens
SGBGSGCGCGS
SCGCGCSCVCS
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_1
0.571
0.571
E2F2
M04699_2.00
Homo sapiens
DWWWDGGCGCCAAAWH
DWTTTGGCGCCHWWWH
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_2
0.571
0.571
E2f3
M00153_2.00
Mus musculus
NNNNGCGSNN
NNSCGCNNNN
PBM
Badis et al.(2009)
E2F3_3752
0.543
0.543
E2F3
M02956_2.00
Homo sapiens
RAAAAKGGCGCCAAAANN
NNTTTTGGCGCCMTTTTY
SELEX
Jolma et al.(2013)
E2F3_1
0.543
0.543
E2F3
M02957_2.00
Homo sapiens
DAAAADGGCGCCMWWTTY
RAAWWKGGCGCCHTTTTH
SELEX
Jolma et al.(2013)
E2F3_2
0.543
0.543
E2F3
M02958_2.00
Homo sapiens
NDTTTTGGCGCCAAAABH
DVTTTTGGCGCCAAAAHN
SELEX
Jolma et al.(2013)
E2F3_3
0.543
0.543
E2F3
M04701_2.00
Homo sapiens
DWTTTGGCGCCAAAWH
DWTTTGGCGCCAAAWH
SELEX
Yin et al.(2017)
E2F3_eDBD_HT-SELEX
0.543
0.543
E2F3
M09031_2.00
Homo sapiens
NDGGCGGGAAR
YTTCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F3_HUMAN.H11MO.0.A
0.543
0.543
E2f3
M09038_2.00
Mus musculus
DSGCGGGARV
BYTCCCGCSH
Misc
Kulakovskiy et al.(2013)
E2F3_MOUSE.H11MO.0.A
0.543
0.543
E2F3
M10454_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6_01
0.543
0.543
E2F3
M10455_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F3_Q6
0.543
0.543
E2F3
M04702_2.00
Homo sapiens
DTTTTGGCGCCAAAAH
DTTTTGGCGCCAAAAH
SELEX
Yin et al.(2017)
E2F3_eDBD_Methyl-HT-SELEX
0.543
0.543
GSPATT00020286001
M01965_2.00
Paramecium tetraurelia
NNSGCGSBN
NVSCGCSNN
PBM
Weirauch et al.(2014)
pTH5647
0.514
0.514
E2FC
M06870_2.00
Arabidopsis thaliana
AWDDDGGCGCCAAAR
YTTTGGCGCCHHHWT
Dap-seq
OMalley et al.(2016)
E2FC_col_a
0.514
0.514
E2F6
M08107_2.00
Homo sapiens
DGGMGGGARVN
NBYTCCCKCCH
ChIP-seq
Mathelier et al.(2014)
MA0471.1
0.486
0.486
E2F6
M07939_2.00
Homo sapiens
NDSGCGGGARV
BYTCCCGCSHN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F6_UCD
0.486
0.486
E2F6
M07940_2.00
Homo sapiens
NDVGCGGGARV
BYTCCCGCBHN
ChIP-seq
Gerstein et al.(2012)
K562b_E2F6_UCD
0.486
0.486
E2F6
M07941_2.00
Homo sapiens
NDSGCGGGARV
BYTCCCGCSHN
ChIP-seq
Gerstein et al.(2012)
K562_E2F6_HudsonAlpha
0.486
0.486
E2f
M08196_2.00
Drosophila melanogaster
AAWWBSSCGSCAA
TTGSCGSSVWWTT
ChIP-seq
Contrino et al.(2012)
Mf10
0.486
0.486
E2F6
M09034_2.00
Homo sapiens
NRGGMGGGARRNN
NNYYTCCCKCCYN
Misc
Kulakovskiy et al.(2013)
E2F6_HUMAN.H11MO.0.A
0.486
0.486
E2F6
M09523_2.00
Homo sapiens
VGCGGGARNN
NNYTCCCGCB
Misc
Heinz et al.(2010)
Hela-E2F6_GSE31477
0.486
0.486
E2F6
M10456_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F6_01
0.486
0.486
E2f6
M09043_2.00
Mus musculus
NDGGCGGGARVV
BBYTCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F6_MOUSE.H11MO.0.A
0.457
0.457
E2F
M01959_2.00
Dictyostelium discoideum
NNGSGCGCSHN
NDSGCGCSCNN
PBM
Weirauch et al.(2014)
pTH5403
0.429
0.429
estExt_gwp_GeneWisePlus.C_Chr_02.00010270
M01969_2.00
Ostreococcus tauri
HRVGCGCCNN
NNGGCGCBYD
PBM
Weirauch et al.(2014)
pTH5701
0.429
0.429
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000000164
E2F
1
40
AADTLAVRRMYDITDVLEGIDVIGKSPPQNSIQGAGCNAK
Links
Other
E2F
family TFs
Other
Echinops telfairi
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R007409
Calypte anna
Aan_R007409
I
0.676
Aan_R013725
Calypte anna
Aan_R013725
I
0.649
Afo_R001855
Aptenodytes forsteri
Afo_R001855
I
0.649
Afo_R010573
Aptenodytes forsteri
Afo_R010573
I
0.676
Alligator_sinensis_CCG016830.1
Alligator sinensis
Alligator_sinensis_CCG016830.1
I
0.462
E2FA
Arabidopsis thaliana
AT2G36010
D
0.600
Bm6651
Brugia malayi
Bm6651
I
0.514
Brh_R002393
Buceros rhinoceros
Brh_R002393
I
0.676
Brh_R008700
Buceros rhinoceros
Brh_R008700
I
0.622
E2F5
Anolis carolinensis
ENSACAG00000014098
I
0.568
ENSAMXG00000006006
Astyanax mexicanus
ENSAMXG00000006006
I
0.571
ENSAPLG00000005664
Anas platyrhynchos
ENSAPLG00000005664
I
0.649
ENSAPLG00000016108
Anas platyrhynchos
ENSAPLG00000016108
I
0.676
E2F5
Bos taurus
ENSBTAG00000009378
I
0.641
E2F5
Canis familiaris
ENSCAFG00000008628
I
0.641
E2F5
Callithrix jacchus
ENSCJAG00000000387
I
0.641
ENSCPOG00000026476
Cavia porcellus
ENSCPOG00000026476
I
0.594
E2f5
Dipodomys ordii
ENSDORG00000011212
I
0.676
E2F5
Equus caballus
ENSECAG00000013766
I
0.625
E2F5
Erinaceus europaeus
ENSEEUG00000014470
I
0.676
ENSFALG00000004897
Ficedula albicollis
ENSFALG00000004897
I
0.490
ENSGGOG00000028133
Gorilla gorilla
ENSGGOG00000028133
I
0.486
ENSMEUG00000002631
Macropus eugenii
ENSMEUG00000002631
I
0.615
ENSMEUG00000012534
Macropus eugenii
ENSMEUG00000012534
I
0.649
ENSMGAG00000002385
Meleagris gallopavo
ENSMGAG00000002385
I
0.513
E2F5
Meleagris gallopavo
ENSMGAG00000011709
I
0.649
E2F5
Microcebus murinus
ENSMICG00000003567
I
0.676
ENSMMUP00000008413
Macaca fascicularis
ENSMMUP00000008413
I
0.641
ENSMPUG00000010751
Mustela putorius furo
ENSMPUG00000010751
I
0.676
ENSNLEG00000004342
Nomascus leucogenys
ENSNLEG00000004342
I
0.571
ENSOARG00000013715
Ovis aries
ENSOARG00000013715
I
0.625
ENSP00000256117-D1
Bos grunniens
ENSP00000256117-D1
I
0.468
ENSPMAG00000000488
Petromyzon marinus
ENSPMAG00000000488
I
0.649
ENSPSIG00000009614
Pelodiscus sinensis
ENSPSIG00000009614
I
0.480
E2F5
Sorex araneus
ENSSARG00000012960
I
0.686
ENSSHAG00000011240
Sarcophilus harrisii
ENSSHAG00000011240
I
0.641
ENSSHAG00000011293
Sarcophilus harrisii
ENSSHAG00000011293
I
0.649
ENSSTOG00000013339
Ictidomys tridecemlineatus
ENSSTOG00000013339
I
0.641
ENSTSYG00000014083
Tarsius syrichta
ENSTSYG00000014083
I
0.676
E2F5
Vicugna pacos
ENSVPAG00000003343
I
0.676
Gfo_R014499
Geospiza fortis
Gfo_R014499
I
0.676
Gfo_R016024
Geospiza fortis
Gfo_R016024
I
0.571
GPUH_0001886201
Gongylonema pulchrum
GPUH_0001886201
I
0.442
ISCW000457
Ixodes scapularis
ISCW000457
I
0.622
L596_g3361
Steinernema carpocapsae
L596_g3361
I
0.571
L889_g4761
Steinernema feltiae
L889_g4761
I
0.571
L892_g31325
Steinernema scapterisci
L892_g31325
I
0.571
L893_g15895
Steinernema glaseri
L893_g15895
I
0.571
L898_g29355
Steinernema monticolum
L898_g29355
I
0.571
XM_002307678.1
Populus trichocarpa
POPTR_0005s25930
I
0.436
RO3G_12705
Rhizopus oryzae
RO3G_12705
I
0.514
Tal_R001534
Tyto alba
Tal_R001534
I
0.649
Tal_R005486
Tyto alba
Tal_R005486
I
0.676