CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSNLEG00000004342
(
Nomascus leucogenys
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
ENSNLEG00000004342
T172779_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E2F4
M02961_2.00
Homo sapiens
AATGGCGCCAAA
TTTGGCGCCATT
SELEX
Jolma et al.(2013)
E2F4_1
1.000
1.000
E2F4
M02962_2.00
Homo sapiens
TTTGGCGCCAAA
TTTGGCGCCAAA
SELEX
Jolma et al.(2013)
E2F4_2
1.000
1.000
E2F4
M04707_2.00
Homo sapiens
NWWKGGCGCCAAAW
WTTTGGCGCCMWWN
SELEX
Yin et al.(2017)
E2F4_eDBD_HT-SELEX
1.000
1.000
E2F4
M08109_2.00
Homo sapiens
NSGCGGGARVN
NBYTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA0470.1
1.000
1.000
E2F4
M07942_2.00
Homo sapiens
SGCGSGARDNNBNVN
NBNVNNHYTCSCGCS
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F4_UCD
1.000
1.000
E2F4
M07943_2.00
Homo sapiens
SGCGGGARDNNBVVN
NBBVNNHYTCCCGCS
ChIP-seq
Gerstein et al.(2012)
K562b_E2F4_UCD
1.000
1.000
E2F4
M09036_2.00
Homo sapiens
VDRGGCGGGRVND
HNBYCCCGCCYHB
Misc
Kulakovskiy et al.(2013)
E2F4_HUMAN.H11MO.0.A
1.000
1.000
E2f4
M09037_2.00
Mus musculus
NRDDGGCGGGRMNN
NNKYCCCGCCHHYN
Misc
Kulakovskiy et al.(2013)
E2F4_MOUSE.H11MO.0.A
1.000
1.000
E2F4
M09524_2.00
Homo sapiens
VGCGSGAADH
DHTTCSCGCB
Misc
Heinz et al.(2010)
K562-E2F4_GSE31477
1.000
1.000
E2F4
M10457_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_05
1.000
1.000
E2F4
M10458_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q3
1.000
1.000
E2F4
M10459_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q6
1.000
1.000
E2f5
M09042_2.00
Mus musculus
NGCGCSAAAN
NTTTSGCGCN
Misc
Kulakovskiy et al.(2013)
E2F5_MOUSE.H11MO.0.B
0.954
0.954
e_gw1.38.2.1
M01968_2.00
Physcomitrella patens
NSGCGCBHHN
NDDVGCGCSN
PBM
Weirauch et al.(2014)
pTH5707
0.754
0.754
estExt_gwp_gw1.C_220046
M01225_2.00
Physcomitrella patens
VGCGCBHHNN
NNDDVGCGCB
PBM
Lambert et al.(2019)
pTH9809
0.754
0.754
ENSACAG00000013716
M01960_2.00
Anolis carolinensis
HNVGCGCBND
HNVGCGCBND
PBM
Weirauch et al.(2014)
pTH9221
0.738
0.738
efl-1
M08110_2.00
Caenorhabditis elegans
HNHNSGCGSSAAWWN
NWWTTSSCGCSNDND
ChIP-seq
Mathelier et al.(2014)
MA0541.1
0.762
0.762
E2F2
M01963_2.00
Tupaia belangeri
WDVGCGCBHW
WDVGCGCBHW
PBM
Weirauch et al.(2014)
pTH9291
0.738
0.738
efl-1
M08197_2.00
Caenorhabditis elegans
BGCGSSAAWW
WWTTSSCGCV
ChIP-seq
Contrino et al.(2012)
Mw140
0.762
0.762
E2f2
M00154_2.00
Mus musculus
NDNNGCGSBN
NVSCGCNNHN
PBM
Badis et al.(2009)
E2F2_1022
0.723
0.723
efl-1
M09526_2.00
Caenorhabditis elegans
WGCAARYGCGCTCYA
TRGAGCGCRYTTGCW
Misc
Heinz et al.(2010)
cElegans-L1-EFL1_modEncode
0.762
0.762
E2FA
M06871_2.00
Arabidopsis thaliana
NDDDGGCGCCAWWW
WWWTGGCGCCHHHN
Dap-seq
OMalley et al.(2016)
E2FA_col_a
0.723
0.723
E2FA
M06872_2.00
Arabidopsis thaliana
DDWDGGCGCCAWAD
HTWTGGCGCCHWHH
Dap-seq
OMalley et al.(2016)
E2FA_colamp_a
0.723
0.723
E2FC
M06870_2.00
Arabidopsis thaliana
AWDDDGGCGCCAAAR
YTTTGGCGCCHHHWT
Dap-seq
OMalley et al.(2016)
E2FC_col_a
0.723
0.723
ENSOANG00000014967
M01962_2.00
Ornithorhynchus anatinus
NDSGCGCSHN
NDSGCGCSHN
PBM
Weirauch et al.(2014)
pTH9382
0.714
0.714
E2FA
M08106_2.00
Arabidopsis thaliana
NVGCGCCAHN
NDTGGCGCBN
ChIP-seq
Mathelier et al.(2014)
MA1414.1
0.723
0.723
E2F3
M01964_2.00
Taeniopygia guttata
NNSGCGCGMN
NKCGCGCSNN
PBM
Weirauch et al.(2014)
pTH9288
0.714
0.714
E2f2
M09039_2.00
Mus musculus
GGCGCGMAWC
GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_MOUSE.H11MO.0.B
0.723
0.723
E2F1
M02952_2.00
Homo sapiens
WWDGGCGCCAAW
WTTGGCGCCHWW
SELEX
Jolma et al.(2013)
E2F1_1
0.714
0.714
E2F2
M01961_2.00
Homo sapiens
DNSGCGCSNH
DNSGCGCSNH
PBM
Weirauch et al.(2014)
pTH9195
0.708
0.708
E2F1
M02953_2.00
Homo sapiens
WWKGGCGCCWWW
WWWGGCGCCMWW
SELEX
Jolma et al.(2013)
E2F1_2
0.714
0.714
E2F1
M02954_2.00
Homo sapiens
WWWKGGCGCCMWWW
WWWKGGCGCCMWWW
SELEX
Jolma et al.(2013)
E2F1_3
0.714
0.714
E2F1
M02955_2.00
Homo sapiens
AAWKGGCGCCAWTW
WAWTGGCGCCMWTT
SELEX
Jolma et al.(2013)
E2F1_4
0.714
0.714
E2F2
M02949_2.00
Homo sapiens
AAAAATGGCGCCAAAAWD
HWTTTTGGCGCCATTTTT
SELEX
Jolma et al.(2013)
E2F2_1
0.708
0.708
E2F1
M04700_2.00
Homo sapiens
NWWWDGGCGCCAAAWH
DWTTTGGCGCCHWWWN
SELEX
Yin et al.(2017)
E2F1_FL_HT-SELEX
0.714
0.714
E2F2
M02950_2.00
Homo sapiens
VDTTTTGGCGCCAAAAHN
NDTTTTGGCGCCAAAAHB
SELEX
Jolma et al.(2013)
E2F2_2
0.708
0.708
E2F2
M02951_2.00
Homo sapiens
AAAWWGGCGCCAWTTT
AAAWTGGCGCCWWTTT
SELEX
Jolma et al.(2013)
E2F2_3
0.708
0.708
E2F2
M04696_2.00
Homo sapiens
GCGCGCGCSYW
WRSGCGCGCGC
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_1
0.708
0.708
E2F2
M04697_2.00
Homo sapiens
NDWWDGGCGCCWWHWN
NWDWWGGCGCCHWWHN
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_2
0.708
0.708
E2F1
M07938_2.00
Homo sapiens
VRRVNRVGCGSGMDS
SHKCSCGCBYNBYYB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F1_UCD
0.714
0.714
E2F2
M09029_2.00
Homo sapiens
GGCGCGMAWC
GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_HUMAN.H11MO.0.B
0.708
0.708
E2F1
M09030_2.00
Homo sapiens
NVNDGGCGGGARVN
NBYTCCCGCCHNBN
Misc
Kulakovskiy et al.(2013)
E2F1_HUMAN.H11MO.0.A
0.714
0.714
E2F2
M04698_2.00
Homo sapiens
SGBGSGCGCGS
SCGCGCSCVCS
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_1
0.708
0.708
E2f1
M09041_2.00
Mus musculus
NDDGGCGGGRVN
NBYCCCGCCHHN
Misc
Kulakovskiy et al.(2013)
E2F1_MOUSE.H11MO.0.A
0.714
0.714
E2F2
M04699_2.00
Homo sapiens
DWWWDGGCGCCAAAWH
DWTTTGGCGCCHWWWH
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_2
0.708
0.708
E2f3
M00153_2.00
Mus musculus
NNNNGCGSNN
NNSCGCNNNN
PBM
Badis et al.(2009)
E2F3_3752
0.692
0.692
E2F1
M09521_2.00
Homo sapiens
NNGGCGGGAA
TTCCCGCCNN
Misc
Heinz et al.(2010)
Hela-E2F1_GSE22478
0.714
0.714
E2F3
M02956_2.00
Homo sapiens
RAAAAKGGCGCCAAAANN
NNTTTTGGCGCCMTTTTY
SELEX
Jolma et al.(2013)
E2F3_1
0.692
0.692
E2F1
M10444_2.00
Homo sapiens
THVGCGCGAAAAHKR
YMDTTTTCGCGCBDA
Transfac
Matys et al.(2006)
V$E2F_01
0.714
0.714
E2F3
M02957_2.00
Homo sapiens
DAAAADGGCGCCMWWTTY
RAAWWKGGCGCCHTTTTH
SELEX
Jolma et al.(2013)
E2F3_2
0.692
0.692
E2F1
M10445_2.00
Homo sapiens
BHKSGCGCSAAA
TTTSGCGCSMDV
Transfac
Matys et al.(2006)
V$E2F_03
0.714
0.714
E2F3
M02958_2.00
Homo sapiens
NDTTTTGGCGCCAAAABH
DVTTTTGGCGCCAAAAHN
SELEX
Jolma et al.(2013)
E2F3_3
0.692
0.692
E2F1
M10446_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_01
0.714
0.714
E2F3
M04701_2.00
Homo sapiens
DWTTTGGCGCCAAAWH
DWTTTGGCGCCAAAWH
SELEX
Yin et al.(2017)
E2F3_eDBD_HT-SELEX
0.692
0.692
E2F1
M10447_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_02
0.714
0.714
E2F3
M09031_2.00
Homo sapiens
NDGGCGGGAAR
YTTCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F3_HUMAN.H11MO.0.A
0.692
0.692
E2F1
M10448_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3_01
0.714
0.714
E2f3
M09038_2.00
Mus musculus
DSGCGGGARV
BYTCCCGCSH
Misc
Kulakovskiy et al.(2013)
E2F3_MOUSE.H11MO.0.A
0.692
0.692
E2F1
M10449_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3
0.714
0.714
E2F3
M10454_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6_01
0.692
0.692
E2F1
M10450_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_01
0.714
0.714
E2F3
M10455_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F3_Q6
0.692
0.692
E2F1
M10451_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_02
0.714
0.714
E2F3
M04702_2.00
Homo sapiens
DTTTTGGCGCCAAAAH
DTTTTGGCGCCAAAAH
SELEX
Yin et al.(2017)
E2F3_eDBD_Methyl-HT-SELEX
0.692
0.692
E2F1
M10452_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4
0.714
0.714
E2f
M08196_2.00
Drosophila melanogaster
AAWWBSSCGSCAA
TTGSCGSSVWWTT
ChIP-seq
Contrino et al.(2012)
Mf10
0.677
0.677
E2F1
M10453_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6
0.714
0.714
GSPATT00020286001
M01965_2.00
Paramecium tetraurelia
NNSGCGSBN
NVSCGCSNN
PBM
Weirauch et al.(2014)
pTH5647
0.667
0.667
E2F
M01959_2.00
Dictyostelium discoideum
NNGSGCGCSHN
NDSGCGCSCNN
PBM
Weirauch et al.(2014)
pTH5403
0.569
0.569
E2F6
M08107_2.00
Homo sapiens
DGGMGGGARVN
NBYTCCCKCCH
ChIP-seq
Mathelier et al.(2014)
MA0471.1
0.595
0.595
E2F6
M07939_2.00
Homo sapiens
NDSGCGGGARV
BYTCCCGCSHN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F6_UCD
0.595
0.595
E2F6
M07940_2.00
Homo sapiens
NDVGCGGGARV
BYTCCCGCBHN
ChIP-seq
Gerstein et al.(2012)
K562b_E2F6_UCD
0.595
0.595
E2F6
M07941_2.00
Homo sapiens
NDSGCGGGARV
BYTCCCGCSHN
ChIP-seq
Gerstein et al.(2012)
K562_E2F6_HudsonAlpha
0.595
0.595
E2F6
M09034_2.00
Homo sapiens
NRGGMGGGARRNN
NNYYTCCCKCCYN
Misc
Kulakovskiy et al.(2013)
E2F6_HUMAN.H11MO.0.A
0.595
0.595
E2f6
M09043_2.00
Mus musculus
NDGGCGGGARVV
BBYTCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F6_MOUSE.H11MO.0.A
0.595
0.595
E2F6
M09523_2.00
Homo sapiens
VGCGGGARNN
NNYTCCCGCB
Misc
Heinz et al.(2010)
Hela-E2F6_GSE31477
0.595
0.595
E2F6
M10456_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F6_01
0.595
0.595
estExt_gwp_GeneWisePlus.C_Chr_02.00010270
M01969_2.00
Ostreococcus tauri
HRVGCGCCNN
NNGGCGCBYD
PBM
Weirauch et al.(2014)
pTH5701
0.538
0.538
efl-2
M01966_2.00
Caenorhabditis elegans
NDBGCGSBNN
NNVSCGCVHN
PBM
Weirauch et al.(2014)
pTH5916
0.492
0.492
efl-2
M00662_2.00
Caenorhabditis elegans
NSGCGSNNDN
NHNNSCGCSN
PBM
Narasimhan et al.(2015)
pTH9173
0.492
0.492
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSNLEP00000005266
E2F
17
82
HEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKG
ENSNLEP00000024156
E2F
10
52
RVGIQAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKG
Links
Other
E2F
family TFs
Other
Nomascus leucogenys
TFs
1112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA001041
Anopheles arabiensis
AARA001041
I
0.000
AATE014015
Anopheles atroparvus
AATE014015
I
0.000
ACEP19392
Atta cephalotes
ACEP19392
I
0.000
ACOM031146
Anopheles coluzzii
ACOM031146
I
0.000
ACYPI42465
Acyrthosiphon pisum
ACYPI42465
I
0.000
ADIR004637
Anopheles dirus
ADIR004637
I
0.000
AFAF019137
Anopheles farauti
AFAF019137
I
0.000
AGAP013373
Anopheles gambiae
AGAP013373
I
0.000
ALUE_0000444101
Ascaris lumbricoides
ALUE_0000444101
I
0.000
AMAM008554
Anopheles maculatus
AMAM008554
I
0.000
AMEC008960
Anopheles melas
AMEC008960
I
0.000
AMEM017086
Anopheles merus
AMEM017086
I
0.000
AMIN005093
Anopheles minimus
AMIN005093
I
0.000
ANCCEY_13266
Ancylostoma ceylanicum
ANCCEY_13266
I
0.000
ANCDUO_24943
Ancylostoma duodenale
ANCDUO_24943
I
0.000
AQUA002501
Anopheles quadriannulatus
AQUA002501
I
0.000
ASIS001395
Anopheles sinensis
ASIS001395
I
0.000
ASTEI09804
Anopheles stephensi
ASTEI09804
I
0.000
ASU_04337
Ascaris suum
ASU_04337
I
0.000
A_07224
Schistosoma haematobium
A_07224
I
0.000
BGIBMGA012499
Bombyx mori
BGIBMGA012499
I
0.000
BXY_1152800
Bursaphelenchus xylophilus
BXY_1152800
I
0.000
CapteG127720
Capitella teleta
CapteG127720
I
0.000
CBG17719
Caenorhabditis briggsae
CBG17719
I
0.000
CBN19084
Caenorhabditis brenneri
CBN19084
I
0.000
Cflo_01350--XP_001122544.1_APIME
Camponotus floridanus
Cflo_01350--XP_001122544.1_APIME
I
0.000
CJA07729
Caenorhabditis japonica
CJA07729
I
0.000
CPIJ011541
Culex quinquefasciatus
CPIJ011541
I
0.000
CpipJ_CPIJ011541
Culex pipiens
CpipJ_CPIJ011541
I
0.000
CRE27973
Caenorhabditis remanei
CRE27973
I
0.000
DAPPUDRAFT_29136
Daphnia pulex
DAPPUDRAFT_29136
I
0.000
DICVIV_09301
Dictyocaulus viviparus
DICVIV_09301
I
0.000
EVEC_0000138401
Enterobius vermicularis
EVEC_0000138401
I
0.000
CG34031
Drosophila melanogaster
FBgn0054031
D
0.000
GB49984
Apis mellifera
GB49984
I
0.000
Hba_06466
Heterorhabditis bacteriophora
Hba_06466
I
0.000
HCOI00175700
Haemonchus contortus
HCOI00175700
I
0.000
HCOI01954600
Haemonchus contortus
HCOI01954600
I
0.000
HelroG153710
Helobdella robusta
HelroG153710
I
0.000
Hsal_01133--XP_001122544.1_APIME
Harpegnathos saltator
Hsal_01133--XP_001122544.1_APIME
I
0.000
KGM_16361
Danaus plexippus
KGM_16361
I
0.000
L596_g24598
Steinernema carpocapsae
L596_g24598
I
0.000
L798_02442
Zootermopsis nevadensis
L798_02442
I
0.000
L889_g935
Steinernema feltiae
L889_g935
I
0.000
L892_g3515
Steinernema scapterisci
L892_g3515
I
0.000
L893_g16008
Steinernema glaseri
L893_g16008
I
0.000
L898_g32563
Steinernema monticolum
L898_g32563
I
0.000
LCUP016407
Lucilia cuprina
LCUP016407
I
0.000
LDEC003580
Leptinotarsa decemlineata
LDEC003580
I
0.000
LotgiG115738
Lottia gigantea
LotgiG115738
I
0.000
MCINX001985
Melitaea cinxia
MCINX001985
I
0.000
MDOA014719
Musca domestica
MDOA014719
I
0.000
MhA1_Contig194.frz3.gene47
Meloidogyne hapla
MhA1_Contig194.frz3.gene47
I
0.000
NECAME_00457
Necator americanus
NECAME_00457
I
0.000
nRc.2.0.1.g02146
Romanomermis culicivorax
nRc.2.0.1.g02146
I
0.000
NV14134
Nasonia vitripennis
NV14134
I
0.000
OESDEN_01506
Oesophagostomum dentatum
OESDEN_01506
I
0.000
PEQ_0000380401
Parascaris equorum
PEQ_0000380401
I
0.000
PHUM606500
Pediculus humanus
PHUM606500
I
0.000
Ppa-ceh-19
Pristionchus pacificus
PPA16223
I
0.000
PPAI000517
Phlebotomus papatasi
PPAI000517
I
0.000
PTRK_0000810400
Parastrongyloides trichosuri
PTRK_0000810400
I
0.000
Q2PE40_DROME
Drosophila melanogaster
Q2PE40_DROME
I
0.000
RPRC000954
Rhodnius prolixus
RPRC000954
I
0.000
RSKR_0000751200
Rhabditophanes kr3021
RSKR_0000751200
I
0.000
Sakowv30014246m.g
Saccoglossus kowalevskii
Sakowv30014246m.g
I
0.000
scaffold330-EXSNAP2012.16
Pristionchus exspectatus
scaffold330-EXSNAP2012.16
I
0.000
SINV22427
Solenopsis invicta
SINV22427
I
0.000
SMAR006886
Strigamia maritima
SMAR006886
I
0.000
SMU15016057
Schmidtea mediterranea
SMU15016057
I
0.000
SMUV_0000895701
Syphacia muris
SMUV_0000895701
I
0.000
SPAL_0000203700
Strongyloides papillosus
SPAL_0000203700
I
0.000
SPU_024093
Strongylocentrotus purpuratus
SPU_024093
I
0.000
SSTP_0001096700
Strongyloides stercoralis
SSTP_0001096700
I
0.000
SVE_0747200
Strongyloides venezuelensis
SVE_0747200
I
0.000
T265_00637
Opisthorchis viverrini
T265_00637
I
0.000
TC001164
Tribolium castaneum
TC001164
I
0.000
TCNE_0001025801
Toxocara canis
TCNE_0001025801
I
0.000
tetur11g02100
Tetranychus urticae
tetur11g02100
I
0.000
ceh-19
Caenorhabditis elegans
WBGene00000442
D
0.000
YQE_08078
Dendroctonus ponderosae
YQE_08078
I
0.000