CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F775_15908
(
Aegilops tauschii
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
F775_15908
T173064_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E2FE
M01958_2.00
Arabidopsis thaliana
HDSGCGCSHD
HDSGCGCSHD
PBM
Weirauch et al.(2014)
pTH8176
0.772
0.772
E2FE
M06873_2.00
Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN
NHHNWNWWTTTCCCGCCAAAA
Dap-seq
OMalley et al.(2016)
DEL1_col_a
0.772
0.772
E2FE
M06874_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL1_colamp_a
0.772
0.772
E2FD
M06875_2.00
Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW
WTTTCCCGCCAAAAHHDWWH
Dap-seq
OMalley et al.(2016)
DEL2_col_a
0.640
0.640
E2FD
M06876_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL2_colamp_a
0.640
0.640
E2FD
M10442_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$E2L1_Q2
0.640
0.640
E2FD
M10443_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$E2L_Q2
0.640
0.640
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.596
0.596
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.596
0.596
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.596
0.596
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.596
0.596
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.596
0.596
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.596
0.596
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.588
0.588
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.588
0.588
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.588
0.588
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMT09387
E2F
45
109
KQKSLGLLCSNFVALYDRDDVETVGLDDAARRLGVERRRIYDIVNVLESVGILVRRAKNRYTWIG
EMT09387
E2F
169
248
KEKSLGLLTQNFVKLFLTMEVETVSLDEAARLLLGERHAESNMRTKVRRLYDIANVLSSLNLIEKTQQVDSRKPAFRWLG
Links
Other
E2F
family TFs
Other
Aegilops tauschii
TFs
330 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB09284.1
Alternaria brassicicola
AB09284.1
N
0.000
COCCADRAFT_83899
Bipolaris zeicola
COCCADRAFT_83899
N
0.000
COCMIDRAFT_24823
Bipolaris oryzae
COCMIDRAFT_24823
N
0.000
COCSADRAFT_291837
Bipolaris sorokiniana
COCSADRAFT_291837
N
0.000
COCVIDRAFT_13259
Bipolaris victoriae
COCVIDRAFT_13259
N
0.000
estExt_fgenesh1_kg.C_190034
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_190034
N
0.000
PTT_10651
Pyrenophora teres
PTT_10651
N
0.000
SETTUDRAFT_167843
Setosphaeria turcica
SETTUDRAFT_167843
N
0.000
SNOG_16487
Stagonospora nodorum
SNOG_16487
N
0.000
SNOG_16487
Phaeosphaeria nodorum
SNOG_16487
N
0.000