CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.32.130.1
(
Bigelowiella natans
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
gw1.32.130.1
T173200_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.431
0.431
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
JGI_V11_31465
E2F
1
74
GLKYLSNKICETLSVMRKTTQEEMIATLFRSFKADGGGYEESEKSIRRRIYDTLNVLLALGLVTRAKQEIEWTG
Links
Other
E2F
family TFs
Other
Bigelowiella natans
TFs
94 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.contig_32800
Carica papaya
evm.TU.contig_32800
I
0.477
tetur36g00480
Tetranychus urticae
tetur36g00480
I
0.000
tetur36g00490
Tetranychus urticae
tetur36g00490
I
0.000
TTHERM_00107000
Tetrahymena thermophila
TTHERM_00107000
I
0.000
TVAG_258390
Trichomonas vaginalis
TVAG_258390
N
0.000