CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OPUNC01G26430
(
Oryza punctata
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
OPUNC01G26430
T173356_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.632
0.632
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.632
0.632
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.603
0.603
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC01G26430.1
E2F
63
140
TGWGLREFSKIVSKKVEAKGRTTYNEVADEIFAELKSITHNGLEFDEKNIRRRVYDAFNVLIAIRVIAKDKKEIKWMG
Links
Other
E2F
family TFs
Other
Oryza punctata
TFs
560 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000962101
Angiostrongylus costaricensis
ACOC_0000962101
I
0.000
ASIM_0001701001
Anisakis simplex
ASIM_0001701001
I
0.000
Bm4873
Brugia malayi
Bm4873
N
0.000
BTMF_0001588101
Brugia timori
BTMF_0001588101
N
0.000
CJA06788
Caenorhabditis japonica
CJA06788
I
0.000
DICVIV_10778
Dictyocaulus viviparus
DICVIV_10778
I
0.000
HPLM_0000508801
Haemonchus placei
HPLM_0000508801
I
0.000
LOAG_17445
Loa loa
LOAG_17445
N
0.000
nAv.1.0.1.g02318
Acanthocheilonema viteae
nAv.1.0.1.g02318
N
0.000
nDi.2.2.2.g06454
Dirofilaria immitis
nDi.2.2.2.g06454
N
0.000
OFLC_0000054701
Onchocerca flexuosa
OFLC_0000054701
N
0.000
SMUV_0000337801
Syphacia muris
SMUV_0000337801
I
0.000
TELCIR_14257
Teladorsagia circumcincta
TELCIR_14257
I
0.000
WBGene00242657
Onchocerca volvulus
WBGene00242657
N
0.000
WUBG_12339
Wuchereria bancrofti
WUBG_12339
N
0.000