CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SNAPOd2T00000785001
(
Oikopleura dioica
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02319 (E2F_TDP)
IPR003316
SNAPOd2T00000785001
T174074_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.565
0.565
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.565
0.565
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.551
0.551
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNAPOd2T00000785001
E2F
126
202
ARGGLRICAKDVCDKVFEKGRTTYFEVANEIVGDSLGTGDVDEKNLKRRVYDALNVLMALNIVHKERNKEKTISWVG
Links
Other
E2F
family TFs
Other
Oikopleura dioica
TFs
529 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP17526
Atta cephalotes
ACEP17526
N
0.000
GB44837
Apis mellifera
GB44837
N
0.000