SPAL_0001132500 (Strongyloides papillosus)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) SPAL_0001132500 T174967_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.738 0.738
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.738 0.738
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.738 0.738
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.738 0.738
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.716 0.716
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.716 0.716
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.712 0.712
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPAL_0001132500.1 EBF1 17 245

Links

Other EBF1 family TFs
Other Strongyloides papillosus TFs

248 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005906 Calypte anna Aan_R005906 I
Afo_R013895 Aptenodytes forsteri Afo_R013895 I
Alligator_sinensis_CCG001426.1 Alligator sinensis Alligator_sinensis_CCG001426.1 I
Brh_R010359 Buceros rhinoceros Brh_R010359 I
Cmyd_10015325 Chelonia mydas Cmyd_10015325 I
MTF1 Anolis carolinensis ENSACAG00000017181 I
ENSAMEG00000001186 Ailuropoda melanoleuca ENSAMEG00000001186 I
ENSAMXG00000001644 Astyanax mexicanus ENSAMXG00000001644 I
ENSAPLG00000016056 Anas platyrhynchos ENSAPLG00000016056 I
MTF1 Bos taurus ENSBTAG00000006511 I
ENSBTAP00000008535-D1 Bos grunniens ENSBTAP00000008535-D1 I
MTF1 Canis familiaris ENSCAFG00000003247 I
MTF1 Callithrix jacchus ENSCJAG00000002097 I
MTF1 Cavia porcellus ENSCPOG00000014657 I
ENSCSAG00000001118 Chlorocebus sabaeus ENSCSAG00000001118 I
MTF1 Dasypus novemcinctus ENSDNOG00000009118 I
MTF1 Equus caballus ENSECAG00000017235 I
MTF1 Echinops telfairi ENSETEG00000003045 I
ENSFALG00000000973 Ficedula albicollis ENSFALG00000000973 I
MTF1 Felis catus ENSFCAG00000011020 I
MTF1 Homo sapiens ENSG00000188786 D
MTF1 Gasterosteus aculeatus ENSGACG00000013875 I
MTF1 Gallus gallus ENSGALG00000001639 I
MTF1 Gorilla gorilla ENSGGOG00000007624 I
ENSGMOG00000015592 Gadus morhua ENSGMOG00000015592 I
ENSLOCG00000003310 Lepisosteus oculatus ENSLOCG00000003310 I
MTF1 Meleagris gallopavo ENSMGAG00000003052 I
MTF1 Microcebus murinus ENSMICG00000011969 I
MTF1 Myotis lucifugus ENSMLUG00000000963 I
MTF1 Macaca mulatta ENSMMUG00000023275 I
MTF1 Monodelphis domestica ENSMODG00000017745 I
ENSMPUG00000014538 Mustela putorius furo ENSMPUG00000014538 I
Mtf1 Mus musculus ENSMUSG00000028890 D
ENSNLEG00000011682 Nomascus leucogenys ENSNLEG00000011682 I
MTF1 Ornithorhynchus anatinus ENSOANG00000002047 I
ENSOARG00000019896 Ovis aries ENSOARG00000019896 I
MTF1 Oryctolagus cuniculus ENSOCUG00000005389 I
ENSONIG00000016218 Oreochromis niloticus ENSONIG00000016218 I
MTF1 Oryzias latipes ENSORLG00000014411 I
ENSP00000362127 Macaca fascicularis ENSP00000362127 I
ENSPANG00000016211 Papio anubis ENSPANG00000016211 I
ENSPFOG00000013962 Poecilia formosa ENSPFOG00000013962 I
ENSPPYG00000001521 Pongo abelii ENSPPYG00000001521 I
ENSPSIG00000005687 Pelodiscus sinensis ENSPSIG00000005687 I
MTF1 Pan troglodytes ENSPTRG00000022932 I
MTF1 Pteropus vampyrus ENSPVAG00000010152 I
Mtf1 Rattus norvegicus ENSRNOG00000025724 I
LOC100909856 Rattus norvegicus ENSRNOG00000050240 I
ENSSHAG00000014007 Sarcophilus harrisii ENSSHAG00000014007 I
ENSSTOG00000025276 Ictidomys tridecemlineatus ENSSTOG00000025276 I
MTF1 Taeniopygia guttata ENSTGUG00000001500 I
MTF1 Takifugu rubripes ENSTRUG00000005297 I
ENSTSYG00000005589 Tarsius syrichta ENSTSYG00000005589 I
MTF1 Tursiops truncatus ENSTTRG00000013535 I
ENSXMAG00000014614 Xiphophorus maculatus ENSXMAG00000014614 I
Gfo_R001683 Geospiza fortis Gfo_R001683 I
Myotis_brandtii_MTF1_10028927 Myotis brandtii Myotis_brandtii_MTF1_10028927 I
Ogr09934 Ophisaurus gracilis Ogr09934 I
Pvit_17763 Pogona vitticeps Pvit_17763 I
Sakowv30031703m.g Saccoglossus kowalevskii Sakowv30031703m.g I
Tal_R009432 Tyto alba Tal_R009432 I
tetur01g09970 Tetranychus urticae tetur01g09970 I
mtf1 Xenopus tropicalis XB-GENE-979128 I
mtf1.L Xenopus laevis XB-GENE-979131 I