CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.19424s0573
(
Boechera stricta
)
EIN3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04873 (EIN3)
IPR006957
Bostr.19424s0573
T175320_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
EIN3
M00725_2.00
Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN
PBM
Chang et al.(2013)
pTH8729
0.996
0.996
EIN3
M06878_2.00
Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC
Dap-seq
OMalley et al.(2016)
EIN3_col_a
0.996
0.996
EIN3
M06879_2.00
Arabidopsis thaliana
RCCGTTR
YAACGGY
Dap-seq
OMalley et al.(2016)
EIN3_colamp_a
0.996
0.996
Q9ZWK1_TOBAC
M10470_2.00
Nicotiana tabacum
AGRTWCAT
ATGWAYCT
Transfac
Matys et al.(2006)
P$TEIL_01
0.923
0.923
EIL1
M00724_2.00
Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN
PBM
Chang et al.(2013)
pTH7932
0.898
0.898
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.841
0.841
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.19424s0573.1.p
EIN3
49
296
DELERRMWRDKMRLKRLKEQDKSKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAENNIPGIHEGNNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGKEDWWPQLGLPKDQGPAPYKKPHDLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEE
Links
Other
EIN3
family TFs
Other
Boechera stricta
TFs
156 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_04327
Ancylostoma caninum
ANCCAN_04327
N
ANCDUO_17822
Ancylostoma duodenale
ANCDUO_17822
N
ANCDUO_27140
Ancylostoma duodenale
ANCDUO_27140
N
CGOC_0001264301
Cylicostephanus goldi
CGOC_0001264301
N
TBX15
Bos taurus
ENSBTAG00000007767
I
HCOI01136500
Haemonchus contortus
HCOI01136500
N
NBR_0001177301
Nippostrongylus brasiliensis
NBR_0001177301
N
NECAME_19347
Necator americanus
NECAME_19347
N
Ocbimv22013221m.g
Octopus bimaculoides
Ocbimv22013221m.g
N
OESDEN_07954
Oesophagostomum dentatum
OESDEN_07954
N
Smp_156650
Schistosoma mansoni
Smp_156650
N
SMTD_0001779301
Schistosoma mattheei
SMTD_0001779301
N
SNAPOd2T00025688001
Oikopleura dioica
SNAPOd2T00025688001
N
SSLN_0001025901
Schistocephalus solidus
SSLN_0001025901
N
SVUK_0001851801
Strongylus vulgaris
SVUK_0001851801
N