CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene00440-v1.0-hybrid
(
Fragaria vesca
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
gene00440-v1.0-hybrid
T181392_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna00440.1-v1.0-hybrid
FAR1
304
394
REAGKRNGFVVVTVRSDLGGKSLKPRVTLGCERGGKFKVHKERCDKGGKQRCGTGSKKCSCPFTLKGEKLTTGDGWMLNVVCGVHNHALTE
Links
Other
FAR1
family TFs
Other
Fragaria vesca
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001298301
Anisakis simplex
ASIM_0001298301
I
ASU_00242
Ascaris suum
ASU_00242
I
Bm5024
Brugia malayi
Bm5024
I
D918_02805
Trichuris suis
D918_02805
I
DME_0000841401
Dracunculus medinensis
DME_0000841401
I
EEL_0000266401
Elaeophora elaphi
EEL_0000266401
I
LOAG_14553
Loa loa
LOAG_14553
I
nLs.2.1.2.g05095
Litomosoides sigmodontis
nLs.2.1.2.g05095
I
WBGene00244521
Onchocerca volvulus
WBGene00244521
I
WUBG_06449
Wuchereria bancrofti
WUBG_06449
I