CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.001G227800
(
Gossypium raimondii
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Gorai.001G227800
T181485_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.001G227800.1
FAR1
54
144
KYYIEYARRIGFMVRIMQRRRSGIDGRTLARRLGCNKQGFSPNHKGTLGQEKKPRPSAREGCKATILVKMEKTGKWVVTRFEKEHNHPLMI
Gorai.001G227800.2
FAR1
49
139
KYYIEYARRIGFMVRIMQRRRSGIDGRTLARRLGCNKQGFSPNHKGTLGQEKKPRPSAREGCKATILVKMEKTGKWVVTRFEKEHNHPLMI
Gorai.001G227800.3
FAR1
11
101
KYYIEYARRIGFMVRIMQRRRSGIDGRTLARRLGCNKQGFSPNHKGTLGQEKKPRPSAREGCKATILVKMEKTGKWVVTRFEKEHNHPLMI
Links
Other
FAR1
family TFs
Other
Gossypium raimondii
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000004509
Ailuropoda melanoleuca
ENSAMEG00000004509
I
ZNF300
Bos taurus
ENSBTAG00000025124
I
ENSBTAP00000018075-D99
Bos grunniens
ENSBTAP00000018075-D99
I
ZNF300
Canis familiaris
ENSCAFG00000001784
I
ZNF300
Callithrix jacchus
ENSCJAG00000020930
I
ENSCSAG00000011310
Chlorocebus sabaeus
ENSCSAG00000011310
I
ENSDNOG00000044315
Dasypus novemcinctus
ENSDNOG00000044315
I
ZNF300
Equus caballus
ENSECAG00000008211
I
ZNF300
Felis catus
ENSFCAG00000022219
I
ZNF300
Homo sapiens
ENSG00000145908
D
ZNF300
Gorilla gorilla
ENSGGOG00000008304
I
ZNF300
Macaca mulatta
ENSMMUG00000012696
I
ENSMPUG00000013725
Mustela putorius furo
ENSMPUG00000013725
I
ENSNLEG00000010439
Nomascus leucogenys
ENSNLEG00000010439
I
ENSOARG00000007879
Ovis aries
ENSOARG00000007879
I
ZNF300
Otolemur garnettii
ENSOGAG00000031549
I
ENSP00000397178
Macaca fascicularis
ENSP00000397178
I
ENSPPYG00000015957
Pongo abelii
ENSPPYG00000015957
I
ZNF300
Pan troglodytes
ENSPTRG00000017426
I
ZNF300
Pteropus vampyrus
ENSPVAG00000005474
I
ZNF300
Sus scrofa
ENSSSCG00000021371
I
ZNF300
Tupaia belangeri
ENSTBEG00000014476
I
ENSTSYG00000009152
Tarsius syrichta
ENSTSYG00000009152
I