CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.006G118900
(
Gossypium raimondii
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Gorai.006G118900
T181500_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.006G118900.1
FAR1
63
157
EFYSEYAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTLNDSKPQRNRKSSRCGCQAYLRISKVTDLGPAEWRVTGFVNHHNHELLE
Gorai.006G118900.2
FAR1
63
157
EFYSEYAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTLNDSKPQRNRKSSRCGCQAYLRISKVTDLGPAEWRVTGFVNHHNHELLE
Gorai.006G118900.3
FAR1
63
157
EFYSEYAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTLNDSKPQRNRKSSRCGCQAYLRISKVTDLGPAEWRVTGFVNHHNHELLE
Gorai.006G118900.4
FAR1
63
157
EFYSEYAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTLNDSKPQRNRKSSRCGCQAYLRISKVTDLGPAEWRVTGFVNHHNHELLE
Links
Other
FAR1
family TFs
Other
Gossypium raimondii
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB00120.1
Alternaria brassicicola
AB00120.1
N
0.000
BAUCODRAFT_58822
Baudoinia compniacensis
BAUCODRAFT_58822
I
0.000
COCC4DRAFT_122844
Bipolaris maydis
COCC4DRAFT_122844
N
0.000
COCCADRAFT_35123
Bipolaris zeicola
COCCADRAFT_35123
N
0.000
COCMIDRAFT_32182
Bipolaris oryzae
COCMIDRAFT_32182
N
0.000
COCSADRAFT_166407
Bipolaris sorokiniana
COCSADRAFT_166407
N
0.000
COCVIDRAFT_32724
Bipolaris victoriae
COCVIDRAFT_32724
N
0.000
LEMA_P069440.1
Leptosphaeria maculans
LEMA_P069440.1
N
0.000
PTRG_10600
Pyrenophora triticirepentis
PTRG_10600
N
0.000
PTT_14120
Pyrenophora teres
PTT_14120
N
0.000
SETTUDRAFT_134971
Setosphaeria turcica
SETTUDRAFT_134971
N
0.000
SNOG_00595
Stagonospora nodorum
SNOG_00595
N
0.000
SNOG_00595
Phaeosphaeria nodorum
SNOG_00595
N
0.000
W97_06628
Coniosporium apollinis
W97_06628
N
0.000