CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.009G127000
(
Gossypium raimondii
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Gorai.009G127000
T181507_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G127000.1
FAR1
62
146
YFYNCYAKEQGFGVRVSNTWYRKTKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKFRLMENKRWRIIEVELDHNHLISA
Gorai.009G127000.2
FAR1
61
145
YFYNCYAKEQGFGVRVSNTWYRKTKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKFRLMENKRWRIIEVELDHNHLISA
Gorai.009G127000.3
FAR1
61
145
YFYNCYAKEQGFGVRVSNTWYRKTKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKFRLMENKRWRIIEVELDHNHLISA
Links
Other
FAR1
family TFs
Other
Gossypium raimondii
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000703501
Angiostrongylus costaricensis
ACOC_0000703501
I
ENSAMXG00000011110
Astyanax mexicanus
ENSAMXG00000011110
N
prox1b
Danio rerio
ENSDARG00000088810
I
ENSGACG00000019750
Gasterosteus aculeatus
ENSGACG00000019750
N
ENSONIG00000013505
Oreochromis niloticus
ENSONIG00000013505
N
ENSPFOG00000006645
Poecilia formosa
ENSPFOG00000006645
N
ENSTNIG00000013016
Tetraodon nigroviridis
ENSTNIG00000013016
N
ENSXMAG00000008639
Xiphophorus maculatus
ENSXMAG00000008639
N