Pavir.Aa01718 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.Aa01718 T181657_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa01718.1.p FAR1 93 181

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006277 Oryza indica BGIOSGA006277 N 0.955
BGIOSGA022378 Oryza indica BGIOSGA022378 N 0.719
BGIOSGA037035 Oryza indica BGIOSGA037035 N 0.730
BRADI3G45470 Brachypodium distachyon BRADI3G45470 N 0.966
BRADI4G41960 Brachypodium distachyon BRADI4G41960 N 0.719
GRMZM2G034868 Zea mays GRMZM2G034868 N 0.730
GRMZM2G043250 Zea mays GRMZM2G043250 N 0.978
GRMZM2G048987 Zea mays GRMZM2G048987 N 0.708
MLOC_13034 Hordeum vulgare MLOC_13034 N 0.719
MLOC_43316 Hordeum vulgare MLOC_43316 N 0.888
OB02G27690 Oryza brachyantha OB02G27690 N 0.955
OB06G14070 Oryza brachyantha OB06G14070 N 0.708
OB12G13670 Oryza brachyantha OB12G13670 N 0.742
OLONG_000187 Oryza longistaminata OLONG_000187 N 0.730
OLONG_002410 Oryza longistaminata OLONG_002410 N 0.798
OLONG_014957 Oryza longistaminata OLONG_014957 N 0.719
ONIVA02G22250 Oryza nivara ONIVA02G22250 N 0.955
ONIVA06G05610 Oryza nivara ONIVA06G05610 N 0.719
ORGLA02G0172700 Oryza glaberrima ORGLA02G0172700 N 0.955
ORGLA06G0040800 Oryza glaberrima ORGLA06G0040800 N 0.719
ORGLA12G0035900 Oryza glaberrima ORGLA12G0035900 N 0.730
OS02G0550900 Oryza sativa OS02G0550900 N 0.955
OS06G0166100 Oryza sativa OS06G0166100 N 0.719
OS12G0160900 Oryza sativa OS12G0160900 N 0.730
Pavir.Ab01899 Panicum virgatum Pavir.Ab01899 N 0.989
Pavir.Ba00843 Panicum virgatum Pavir.Ba00843 N 0.708
Pavir.Bb02863 Panicum virgatum Pavir.Bb02863 N 0.708
Pavir.Ca00202 Panicum virgatum Pavir.Ca00202 N 0.730
Pavir.Cb02030 Panicum virgatum Pavir.Cb02030 N 0.730
Sb02g034560 Sorghum bicolor Sb02g034560 N 0.708
Sb04g022400 Sorghum bicolor Sb04g022400 N 0.955
Sb08g003780 Sorghum bicolor Sb08g003780 N 0.742
Si009370m.g Setaria italica Si009370m.g N 0.730
Si016477m.g Setaria italica Si016477m.g N 0.989
Si029002m.g Setaria italica Si029002m.g N 0.708
Traes_4AL_8B3A3CC2F Triticum aestivum Traes_4AL_8B3A3CC2F N 0.888
Traes_5AS_385093B54 Triticum aestivum Traes_5AS_385093B54 N 0.708
Traes_5BS_BCC406654 Triticum aestivum Traes_5BS_BCC406654 N 0.708
Traes_5DS_620A46565 Triticum aestivum Traes_5DS_620A46565 N 0.708
Traes_7BS_1B525AFF5 Triticum aestivum Traes_7BS_1B525AFF5 N 0.719
Traes_7DS_016F8E2EA Triticum aestivum Traes_7DS_016F8E2EA N 0.888
Traes_7DS_559DD9894 Triticum aestivum Traes_7DS_559DD9894 N 0.719
TRIUR3_03719 Triticum urartu TRIUR3_03719 N 0.719
TRIUR3_25143 Triticum urartu TRIUR3_25143 N 0.708