CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ba00916
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Ba00916
T181670_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba00916.1.p
FAR1
57
144
QFYVTYGCHAGFGITRRSNNTFDGFRYRSTFICSKGGQSRLRSGVTRPARKRGMKTGCKAKMIVKDAHFQNRWEVIVLELEHNHPLDP
Pavir.Ba00916.2.p
FAR1
57
144
QFYVTYGCHAGFGITRRSNNTFDGFRYRSTFICSKGGQSRLRSGVTRPARKRGMKTGCKAKMIVKDAHFQNRWEVIVLELEHNHPLDP
Pavir.Ba00916.3.p
FAR1
57
144
QFYVTYGCHAGFGITRRSNNTFDGFRYRSTFICSKGGQSRLRSGVTRPARKRGMKTGCKAKMIVKDAHFQNRWEVIVLELEHNHPLDP
Pavir.Ba00916.4.p
FAR1
57
144
QFYVTYGCHAGFGITRRSNNTFDGFRYRSTFICSKGGQSRLRSGVTRPARKRGMKTGCKAKMIVKDAHFQNRWEVIVLELEHNHPLDP
Pavir.Ba00916.5.p
FAR1
57
144
QFYVTYGCHAGFGITRRSNNTFDGFRYRSTFICSKGGQSRLRSGVTRPARKRGMKTGCKAKMIVKDAHFQNRWEVIVLELEHNHPLDP
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O7_07585
Cladophialophora yegresii
A1O7_07585
N
0.000
CFIO01_09363
Colletotrichum fioriniae
CFIO01_09363
N
0.000
CTHT_0055390
Chaetomium thermophilum
CTHT_0055390
N
0.000
fgenesh1_pm.sca_27_chr9_1_0000106
Nectria haematococca
fgenesh1_pm.sca_27_chr9_1_0000106
N
0.000
MAC_05412
Metarhizium acridum
MAC_05412
N
0.000
MAJ_06315
Metarhizium majus
MAJ_06315
N
0.000
MANI_003941
Metarhizium anisopliae
MANI_003941
N
0.000
MBR_05357
Metarhizium brunneum
MBR_05357
N
0.000
MGU_05414
Metarhizium guizhouense
MGU_05414
N
0.000
MYCTH_44604
Myceliophthora thermophila
MYCTH_44604
N
0.000
NechaG96010
Fusarium solani
NechaG96010
N
0.000
PFICI_10838
Pestalotiopsis fici
PFICI_10838
N
0.000
THITE_2056521
Thielavia terrestris
THITE_2056521
N
0.000
TRIATDRAFT_166394
Trichoderma atroviride
TRIATDRAFT_166394
N
0.000
TRIREDRAFT_120988
Trichoderma reesei
TRIREDRAFT_120988
N
0.000
TRIVIDRAFT_134018
Trichoderma virens
TRIVIDRAFT_134018
N
0.000
TRIVIDRAFT_152535
Trichoderma virens
TRIVIDRAFT_152535
N
0.000
X797_010556
Metarhizium robertsii
X797_010556
N
0.000