CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Bb03235
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Bb03235
T181682_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Bb03235.1.p
FAR1
108
220
EFYNSYAKRIGFSVRTILFVCNKEGRGRKMKEGNSVVEYDDSDSTVRESEPVNNDEGNDIENAEKKKKMDGGKKRKREKMHHTDCKARMIVKLIGDRWHVIFFAPDHNHDLVV
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_06446
Arthroderma benhamiae
ARB_06446
N
ATEG_00121
Aspergillus terreus
CADATEAG00010137
I
CIMG_02171
Coccidioides immitis
CIMG_02171
I
CPC735_038450
Coccidioides posadasii
CPC735_038450
I
H101_03725
Trichophyton interdigitale
H101_03725
N
H102_06560
Trichophyton rubrum
H102_06560
N
MCYG_07723
Microsporum canis
MCYG_07723
I
MCYG_07723
Arthroderma otae
MCYG_07723
I
MGG_09200
Magnaporthe oryzae
MGG_09200
I
MGYG_05033
Microsporum gypseum
MGYG_05033
N
PDE_06517
Penicillium oxalicum
PDE_06517
I
PVAR5_2782
Byssochlamys spectabilis
PVAR5_2782
I
TEQG_00199
Trichophyton equinum
TEQG_00199
N
TESG_03468
Trichophyton tonsurans
TESG_03468
N
TRV_04166
Trichophyton verrucosum
TRV_04166
N
UREG_01543
Uncinocarpus reesii
UREG_01543
I