Pavir.Cb01881 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.Cb01881 T181698_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Cb01881.1.p FAR1 80 172

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDP1 Aedes aegypti AAEL005255 I 0.000
AALB004300 Anopheles albimanus AALB004300 I 0.000
Aan_R004902 Calypte anna Aan_R004902 I 0.000
Aan_R013230 Calypte anna Aan_R013230 I 0.000
AARA000887 Anopheles arabiensis AARA000887 I 0.000
AATE006511 Anopheles atroparvus AATE006511 I 0.000
ACEP27179 Atta cephalotes ACEP27179 I 0.000
ACOM039838 Anopheles coluzzii ACOM039838 I 0.000
ACUA004794 Anopheles culicifacies ACUA004794 I 0.000
ADAC004162 Anopheles darlingi ADAC004162 I 0.000
ADIR007438 Anopheles dirus ADIR007438 I 0.000
AEPI005427 Anopheles epiroticus AEPI005427 I 0.000
AFAF017409 Anopheles farauti AFAF017409 I 0.000
Afo_R002997 Aptenodytes forsteri Afo_R002997 I 0.000
Afo_R007951 Aptenodytes forsteri Afo_R007951 I 0.000
AFUN000141 Anopheles funestus AFUN000141 I 0.000
PDP1 Anopheles gambiae AGAP006376 I 0.000
Alligator_sinensis_CCG007983.1 Alligator sinensis Alligator_sinensis_CCG007983.1 I 0.000
Alligator_sinensis_CCG018001.1 Alligator sinensis Alligator_sinensis_CCG018001.1 I 0.000
Alligator_sinensis_CCG020587.1 Alligator sinensis Alligator_sinensis_CCG020587.1 I 0.000
AMEM018156 Anopheles merus AMEM018156 I 0.000
AMIN007990 Anopheles minimus AMIN007990 I 0.000
AQUA000938 Anopheles quadriannulatus AQUA000938 I 0.000
ASIS001542 Anopheles sinensis ASIS001542 I 0.000
ASTEI09431 Anopheles stephensi ASTEI09431 I 0.000
BGIBMGA003874 Bombyx mori BGIBMGA003874 I 0.000
Brh_R008067 Buceros rhinoceros Brh_R008067 I 0.000
Brh_R010854 Buceros rhinoceros Brh_R010854 I 0.000
CapteG151518 Capitella teleta CapteG151518 I 0.000
Cflo_03674--XP_391997.2_APIME Camponotus floridanus Cflo_03674--XP_391997.2_APIME I 0.000
CGI_10003797 Crassostrea gigas CGI_10003797 N 0.000
CGI_10008414 Crassostrea gigas CGI_10008414 I 0.000
Cmyd_10013489 Chelonia mydas Cmyd_10013489 I 0.000
PDP1 Culex quinquefasciatus CPIJ014920 I 0.000
CpipJ_CPIJ014920 Culex pipiens CpipJ_CPIJ014920 I 0.000
TEF Anolis carolinensis ENSACAG00000004810 I 0.000
DBP Anolis carolinensis ENSACAG00000015667 I 0.000
HLF Anolis carolinensis ENSACAG00000017417 I 0.000
ENSAMEG00000002146 Ailuropoda melanoleuca ENSAMEG00000002146 I 0.000
ENSAMEG00000014714 Ailuropoda melanoleuca ENSAMEG00000014714 I 0.000
ENSAMXG00000008798 Astyanax mexicanus ENSAMXG00000008798 I 0.000
ENSAMXG00000009417 Astyanax mexicanus ENSAMXG00000009417 I 0.000
ENSAMXG00000015442 Astyanax mexicanus ENSAMXG00000015442 I 0.000
ENSAMXG00000016053 Astyanax mexicanus ENSAMXG00000016053 I 0.000
ENSAMXG00000017639 Astyanax mexicanus ENSAMXG00000017639 I 0.000
ENSAPLG00000004386 Anas platyrhynchos ENSAPLG00000004386 I 0.000
ENSAPLG00000005838 Anas platyrhynchos ENSAPLG00000005838 I 0.000
HLF Bos taurus ENSBTAG00000006618 I 0.000
TEF Bos taurus ENSBTAG00000016580 I 0.000
ENSBTAP00000008682-D1 Bos grunniens ENSBTAP00000008682-D1 I 0.000
ENSBTAP00000022056-D1 Bos grunniens ENSBTAP00000022056-D1 I 0.000
TEF Canis familiaris ENSCAFG00000001095 I 0.000
HLF Canis familiaris ENSCAFG00000030851 I 0.000
ENSCHOG00000001396 Choloepus hoffmanni ENSCHOG00000001396 I 0.000
TEF Choloepus hoffmanni ENSCHOG00000009442 I 0.000
tef/hlf Ciona intestinalis ENSCING00000002295 N 0.000
TEF Callithrix jacchus ENSCJAG00000004977 I 0.000
HLF Callithrix jacchus ENSCJAG00000011298 I 0.000
ENSCPOG00000011000 Cavia porcellus ENSCPOG00000011000 I 0.000
TEF Cavia porcellus ENSCPOG00000020591 I 0.000
ENSCSAG00000005557 Chlorocebus sabaeus ENSCSAG00000005557 I 0.000
ENSCSAG00000005816 Chlorocebus sabaeus ENSCSAG00000005816 I 0.000
tefa Danio rerio ENSDARG00000039117 I 0.000
hlfb Danio rerio ENSDARG00000061011 I 0.000
dbpa Danio rerio ENSDARG00000063014 I 0.000
hlfa Danio rerio ENSDARG00000074752 I 0.000
tefb Danio rerio ENSDARG00000098103 I 0.000
TEF Dasypus novemcinctus ENSDNOG00000035257 I 0.000
ENSDORG00000012644 Dipodomys ordii ENSDORG00000012644 I 0.000
Tef Dipodomys ordii ENSDORG00000014982 I 0.000
HLF Equus caballus ENSECAG00000016953 I 0.000
TEF Equus caballus ENSECAG00000018137 I 0.000
HLF Erinaceus europaeus ENSEEUG00000010964 I 0.000
HLF Echinops telfairi ENSETEG00000017670 I 0.000
ENSFALG00000002265 Ficedula albicollis ENSFALG00000002265 I 0.000
ENSFALG00000011967 Ficedula albicollis ENSFALG00000011967 I 0.000
TEF Felis catus ENSFCAG00000003674 I 0.000
HLF Felis catus ENSFCAG00000022556 I 0.000
HLF Homo sapiens ENSG00000108924 D 0.000
TEF Homo sapiens ENSG00000167074 D 0.000
tefa Gasterosteus aculeatus ENSGACG00000004793 I 0.000
tefb Gasterosteus aculeatus ENSGACG00000007628 I 0.000
hlfb Gasterosteus aculeatus ENSGACG00000010103 I 0.000
HLF Gallus gallus ENSGALG00000003059 I 0.000
TEF Gallus gallus ENSGALG00000011958 I 0.000
HLF Gorilla gorilla ENSGGOG00000006075 I 0.000
TEF Gorilla gorilla ENSGGOG00000016460 I 0.000
ENSGMOG00000004830 Gadus morhua ENSGMOG00000004830 I 0.000
ENSGMOG00000013327 Gadus morhua ENSGMOG00000013327 I 0.000
ENSGMOG00000014488 Gadus morhua ENSGMOG00000014488 I 0.000
ENSLACG00000006062 Latimeria chalumnae ENSLACG00000006062 I 0.000
ENSLACG00000012701 Latimeria chalumnae ENSLACG00000012701 I 0.000
ENSLACG00000012726 Latimeria chalumnae ENSLACG00000012726 I 0.000
TEF Loxodonta africana ENSLAFG00000013151 I 0.000
HLF Loxodonta africana ENSLAFG00000016475 I 0.000
ENSLOCG00000011595 Lepisosteus oculatus ENSLOCG00000011595 I 0.000
ENSLOCG00000012233 Lepisosteus oculatus ENSLOCG00000012233 I 0.000
ENSMEUG00000013604 Macropus eugenii ENSMEUG00000013604 I 0.000
ENSMEUG00000016384 Macropus eugenii ENSMEUG00000016384 I 0.000
TEF Meleagris gallopavo ENSMGAG00000012262 I 0.000
ENSMICG00000002860 Microcebus murinus ENSMICG00000002860 I 0.000
ENSMICG00000013518 Microcebus murinus ENSMICG00000013518 I 0.000
TEF Myotis lucifugus ENSMLUG00000002459 I 0.000
HLF Myotis lucifugus ENSMLUG00000007393 I 0.000
TEF Macaca mulatta ENSMMUG00000005221 I 0.000
HLF Macaca mulatta ENSMMUG00000022627 I 0.000
HLF Monodelphis domestica ENSMODG00000014851 I 0.000
TEF Monodelphis domestica ENSMODG00000016547 I 0.000
ENSMPUG00000015400 Mustela putorius furo ENSMPUG00000015400 I 0.000
ENSMPUG00000016407 Mustela putorius furo ENSMPUG00000016407 I 0.000
Hlf Mus musculus ENSMUSG00000003949 D 0.000
Tef Mus musculus ENSMUSG00000022389 D 0.000
ENSNLEG00000007993 Nomascus leucogenys ENSNLEG00000007993 I 0.000
ENSNLEG00000015473 Nomascus leucogenys ENSNLEG00000015473 I 0.000
HLF Ornithorhynchus anatinus ENSOANG00000010288 I 0.000
TEF Ornithorhynchus anatinus ENSOANG00000011535 I 0.000
ENSOARG00000018238 Ovis aries ENSOARG00000018238 I 0.000
HLF Oryctolagus cuniculus ENSOCUG00000010547 I 0.000
TEF Oryctolagus cuniculus ENSOCUG00000012866 I 0.000
HLF Otolemur garnettii ENSOGAG00000007056 I 0.000
TEF Otolemur garnettii ENSOGAG00000025997 I 0.000
ENSONIG00000007041 Oreochromis niloticus ENSONIG00000007041 I 0.000
ENSONIG00000008480 Oreochromis niloticus ENSONIG00000008480 I 0.000
ENSONIG00000009563 Oreochromis niloticus ENSONIG00000009563 I 0.000
ENSONIG00000012778 Oreochromis niloticus ENSONIG00000012778 I 0.000
ENSONIG00000019079 Oreochromis niloticus ENSONIG00000019079 I 0.000
ENSONIG00000019694 Oreochromis niloticus ENSONIG00000019694 I 0.000
HLF Ochotona princeps ENSOPRG00000004195 I 0.000
TEF Ochotona princeps ENSOPRG00000013592 I 0.000
hlfa Oryzias latipes ENSORLG00000000969 I 0.000
tefa Oryzias latipes ENSORLG00000002582 I 0.000
ENSORLG00000011412 Oryzias latipes ENSORLG00000011412 I 0.000
tefb Oryzias latipes ENSORLG00000014144 I 0.000
ENSP00000226067 Macaca fascicularis ENSP00000226067 I 0.000
ENSP00000403078 Macaca fascicularis ENSP00000403078 I 0.000
ENSPANG00000022360 Papio anubis ENSPANG00000022360 I 0.000
ENSPANG00000024579 Papio anubis ENSPANG00000024579 I 0.000
ENSPFOG00000004560 Poecilia formosa ENSPFOG00000004560 I 0.000
ENSPFOG00000007430 Poecilia formosa ENSPFOG00000007430 I 0.000
ENSPFOG00000010189 Poecilia formosa ENSPFOG00000010189 I 0.000
ENSPFOG00000013950 Poecilia formosa ENSPFOG00000013950 I 0.000
ENSPFOG00000016821 Poecilia formosa ENSPFOG00000016821 I 0.000
ENSPFOG00000018222 Poecilia formosa ENSPFOG00000018222 I 0.000
ENSPPYG00000008257 Pongo abelii ENSPPYG00000008257 I 0.000
ENSPPYG00000011867 Pongo abelii ENSPPYG00000011867 I 0.000
ENSPSIG00000006835 Pelodiscus sinensis ENSPSIG00000006835 I 0.000
ENSPSIG00000016356 Pelodiscus sinensis ENSPSIG00000016356 I 0.000
HLF Pan troglodytes ENSPTRG00000009424 I 0.000
TEF Pan troglodytes ENSPTRG00000014425 I 0.000
TEF Pteropus vampyrus ENSPVAG00000001160 I 0.000
HLF Pteropus vampyrus ENSPVAG00000007461 I 0.000
Hlf Rattus norvegicus ENSRNOG00000002456 I 0.000
Tef Rattus norvegicus ENSRNOG00000019383 I 0.000
TEF Sorex araneus ENSSARG00000003323 I 0.000
ENSSARG00000013841 Sorex araneus ENSSARG00000013841 I 0.000
ENSSHAG00000009361 Sarcophilus harrisii ENSSHAG00000009361 I 0.000
ENSSHAG00000015304 Sarcophilus harrisii ENSSHAG00000015304 I 0.000
ENSSTOG00000019642 Ictidomys tridecemlineatus ENSSTOG00000019642 I 0.000
ENSSTOG00000029018 Ictidomys tridecemlineatus ENSSTOG00000029018 I 0.000
HLF Tupaia belangeri ENSTBEG00000006958 I 0.000
TEF Tupaia belangeri ENSTBEG00000010576 I 0.000
HLF Taeniopygia guttata ENSTGUG00000009478 I 0.000
TEF Taeniopygia guttata ENSTGUG00000009944 I 0.000
ENSTNIG00000002167 Tetraodon nigroviridis ENSTNIG00000002167 I 0.000
ENSTNIG00000003545 Tetraodon nigroviridis ENSTNIG00000003545 I 0.000
ENSTNIG00000004400 Tetraodon nigroviridis ENSTNIG00000004400 I 0.000
ENSTNIG00000008098 Tetraodon nigroviridis ENSTNIG00000008098 I 0.000
hlfa Tetraodon nigroviridis ENSTNIG00000011274 I 0.000
tefa Tetraodon nigroviridis ENSTNIG00000012940 I 0.000
tefb Takifugu rubripes ENSTRUG00000003565 I 0.000
hlfa Takifugu rubripes ENSTRUG00000003731 I 0.000
ENSTRUG00000003893 Takifugu rubripes ENSTRUG00000003893 I 0.000
hlfb Takifugu rubripes ENSTRUG00000003909 I 0.000
ENSTRUG00000007098 Takifugu rubripes ENSTRUG00000007098 I 0.000
tefa Takifugu rubripes ENSTRUG00000017028 I 0.000
ENSTSYG00000008965 Tarsius syrichta ENSTSYG00000008965 I 0.000
ENSTSYG00000009210 Tarsius syrichta ENSTSYG00000009210 I 0.000
TEF Tursiops truncatus ENSTTRG00000003365 I 0.000
HLF Tursiops truncatus ENSTTRG00000007194 I 0.000
TEF Vicugna pacos ENSVPAG00000002612 I 0.000
ENSXMAG00000000678 Xiphophorus maculatus ENSXMAG00000000678 I 0.000
ENSXMAG00000012054 Xiphophorus maculatus ENSXMAG00000012054 I 0.000
ENSXMAG00000012903 Xiphophorus maculatus ENSXMAG00000012903 I 0.000
ENSXMAG00000016939 Xiphophorus maculatus ENSXMAG00000016939 I 0.000
e_gw.24.282.1 Branchiostoma floridae e_gw.24.282.1 I 0.000
e_gw.273.32.1 Branchiostoma floridae e_gw.273.32.1 I 0.000
e_gw.273.54.1 Branchiostoma floridae e_gw.273.54.1 I 0.000
Pdp1 Drosophila melanogaster FBgn0016694 D 0.000
GF24150 Drosophila ananassae FBgn0101144 I 0.000
GG14935 Drosophila erecta FBgn0107189 I 0.000
GH23565 Drosophila grimshawi FBgn0131022 I 0.000
GI12193 Drosophila mojavensis FBgn0134950 I 0.000
GL17823 Drosophila persimilis FBgn0155426 I 0.000
GM24985 Drosophila sechellia FBgn0179846 I 0.000
GD13032 Drosophila simulans FBgn0184754 I 0.000
GJ11425 Drosophila virilis FBgn0198683 I 0.000
GK10510 Drosophila willistoni FBgn0212525 I 0.000
GE20386 Drosophila yakuba FBgn0237702 I 0.000
GA28498 Drosophila pseudoobscura FBgn0249858 I 0.000
GB43643 Apis mellifera GB43643 I 0.000
Gfo_R004744 Geospiza fortis Gfo_R004744 I 0.000
Gfo_R006518 Geospiza fortis Gfo_R006518 I 0.000
HHAL005759-PA Halyomorpha halys HHAL005759-PA I 0.000
HMEL011029 Heliconius melpomene HMEL011029 I 0.000
Hsal_12188--XP_391997.2_APIME Harpegnathos saltator Hsal_12188--XP_391997.2_APIME I 0.000
ISCW004978 Ixodes scapularis ISCW004978 I 0.000
KGM_21614 Danaus plexippus KGM_21614 I 0.000
LCUP014933 Lucilia cuprina LCUP014933 I 0.000
LLOJ006612 Lutzomyia longipalpis LLOJ006612 I 0.000
MCINX004280 Melitaea cinxia MCINX004280 I 0.000
MDOA003519 Musca domestica MDOA003519 I 0.000
Myotis_brandtii_Hlf_10020713 Myotis brandtii Myotis_brandtii_Hlf_10020713 I 0.000
Myotis_brandtii_Tef_10013968 Myotis brandtii Myotis_brandtii_Tef_10013968 I 0.000
NV13265 Nasonia vitripennis NV13265 I 0.000
Ocbimv22024947m.g Octopus bimaculoides Ocbimv22024947m.g I 0.000
Ogr00037 Ophisaurus gracilis Ogr00037 I 0.000
Ogr12886 Ophisaurus gracilis Ogr12886 I 0.000
Ogr14443 Ophisaurus gracilis Ogr14443 I 0.000
PPAI002842 Phlebotomus papatasi PPAI002842 I 0.000
Pvit_00680 Pogona vitticeps Pvit_00680 I 0.000
Pvit_12136 Pogona vitticeps Pvit_12136 I 0.000
Pvit_18616 Pogona vitticeps Pvit_18616 I 0.000
SMAR002779 Strigamia maritima SMAR002779 I 0.000
SPU_004414 Strongylocentrotus purpuratus SPU_004414 I 0.000
Tal_R002658 Tyto alba Tal_R002658 I 0.000
Tal_R009182 Tyto alba Tal_R009182 I 0.000
tetur19g00770 Tetranychus urticae tetur19g00770 I 0.000
dbp Xenopus tropicalis XB-GENE-5995286 I 0.000
dbp.L Xenopus laevis XB-GENE-6256610 I 0.000
hlf Xenopus tropicalis XB-GENE-955698 I 0.000
tef Xenopus tropicalis XB-GENE-962732 I 0.000
tef.S Xenopus laevis XB-GENE-962737 I 0.000
XP_002937859 Xenopus tropicalis XP_002937859 I 0.000
YQE_01842 Dendroctonus ponderosae YQE_01842 I 0.000