CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Ga00446
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Ga00446
T181738_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ga00446.1.p
FAR1
193
277
EYYVSYAGNMGFSVRKGWLDKTSKNSNRSRVYICSREGLRSKNDAKRSRPETRMGCPARIAIKLTPSGKYRITEFVEDHNHQLAA
Pavir.Ga00446.2.p
FAR1
193
277
EYYVSYAGNMGFSVRKGWLDKTSKNSNRSRVYICSREGLRSKNDAKRSRPETRMGCPARIAIKLTPSGKYRITEFVEDHNHQLAA
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPER_0000051501
Spirometra erinaceieuropaei
SPER_0000051501
N
SPER_0000339601
Spirometra erinaceieuropaei
SPER_0000339601
N
SPER_0000570401
Spirometra erinaceieuropaei
SPER_0000570401
N
SPER_0002407101
Spirometra erinaceieuropaei
SPER_0002407101
N
SPER_0003660701
Spirometra erinaceieuropaei
SPER_0003660701
N
SSLN_0000288601
Schistocephalus solidus
SSLN_0000288601
N
SSLN_0000540401
Schistocephalus solidus
SSLN_0000540401
N
SSLN_0000998701
Schistocephalus solidus
SSLN_0000998701
N
SSLN_0001584801
Schistocephalus solidus
SSLN_0001584801
N
SSLN_0001650501
Schistocephalus solidus
SSLN_0001650501
N
SSLN_0001662301
Schistocephalus solidus
SSLN_0001662301
N
SSLN_0002021001
Schistocephalus solidus
SSLN_0002021001
N