CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J08512
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.J08512
T181800_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J08512.1.p
FAR1
98
209
EFYNSYAKRIGFSIRTSTTRLSGVTREQNKVQFVCNKEGRQRKTKEDNFDGDSDPNDCDEGAEKKKKLDGGKKRKMEKMMHTDCKAKMVVKLIAGKWHVINFVPDHNHDLVL
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP23984
Atta cephalotes
ACEP23984
N
ACYPI010120
Acyrthosiphon pisum
ACYPI010120
N
BGIBMGA006998
Bombyx mori
BGIBMGA006998
N
Cflo_11504--XP_625193.1_APIME
Camponotus floridanus
Cflo_11504--XP_625193.1_APIME
N
CLEC012339
Cimex lectularius
CLEC012339
N
GB44345
Apis mellifera
GB44345
N
HMEL002439
Heliconius melpomene
HMEL002439
N
Hsal_18129--FBpp0074818_DROME
Harpegnathos saltator
Hsal_18129--FBpp0074818_DROME
N
KGM_17736
Danaus plexippus
KGM_17736
N
L798_00751
Zootermopsis nevadensis
L798_00751
N
LDEC016293
Leptinotarsa decemlineata
LDEC016293
N
MCINX008866
Melitaea cinxia
MCINX008866
N
NV21329
Nasonia vitripennis
NV21329
N
PPAI000151
Phlebotomus papatasi
PPAI000151
N
RPRC014794
Rhodnius prolixus
RPRC014794
N
SINV16181
Solenopsis invicta
SINV16181
N
TC006235
Tribolium castaneum
TC006235
N