FOXC1 (Callithrix jacchus)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSCJAG00000019597 T185381_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXC1
M00257_2.00 		Homo sapiens
NNNVHHAAYA
TRTTDDBNNN		 PBM
Barrera et al.(2016)
FOXC1_REF 		0.726 0.925
Foxc1
M01982_2.00 		Mus musculus
HNNRHMAAYA
TRTTKDYNND		 PBM
Weirauch et al.(2014)
pTH2673 		0.726 0.925
FOXC1
M03013_2.00 		Homo sapiens
AWRTAAAYAAAYA
TRTTTRTTTAYWT		 SELEX
Jolma et al.(2013)
FOXC1_1 		0.726 0.925
FOXC1
M03014_2.00 		Homo sapiens
NRWMAATATTKWYN
NRWMAATATTKWYN		 SELEX
Jolma et al.(2013)
FOXC1_2 		0.726 0.925
FOXC1
M03015_2.00 		Homo sapiens
WRWRTMAAYAW
WTRTTKAYWYW		 SELEX
Jolma et al.(2013)
FOXC1_3 		0.726 0.925
Foxc1
M03059_2.00 		Mus musculus
RTAAAYAAACA
TGTTTRTTTAY		 SELEX
Jolma et al.(2013)
Foxc1_1 		0.726 0.925
Foxc1
M03060_2.00 		Mus musculus
RTAAACA
TGTTTAY		 SELEX
Jolma et al.(2013)
Foxc1_2 		0.726 0.925
FOXC1
M09083_2.00 		Homo sapiens
SBWAWRTAAACADHN
NDHTGTTTAYWTWVS		 Misc
Kulakovskiy et al.(2013)
FOXC1_HUMAN.H11MO.0.C 		0.726 0.925
Foxc1
M09111_2.00 		Mus musculus
SBWAWRTAAACADHN
NDHTGTTTAYWTWVS		 Misc
Kulakovskiy et al.(2013)
FOXC1_MOUSE.H11MO.0.C 		0.726 0.925
FOXC1
M10525_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXC1_Q4 		0.726 0.925
FOXC1
M10526_2.00 		Homo sapiens
TSTTTATTTACDBNVN
NBNVHGTAAATAAASA		 Transfac
Matys et al.(2006)
V$FREAC3_01 		0.726 0.925
FOXC1
M00253_2.00 		Homo sapiens
NNHATAAWHAN
NTDWTTATDNN		 PBM
Barrera et al.(2016)
FOXC1_F112S 		0.726 0.910
FOXC1
M00255_2.00 		Homo sapiens
NRTATATWHNNN
NNNDWATATAYN		 PBM
Barrera et al.(2016)
FOXC1_L130F 		0.726 0.910
FOXC1
M00256_2.00 		Homo sapiens
NNNNWWTYAMAWN
NWTKTRAWWNNNN		 PBM
Barrera et al.(2016)
FOXC1_P79L 		0.726 0.910
FOXC1
M00258_2.00 		Homo sapiens
NNNAMAAYANN
NNTRTTKTNNN		 PBM
Barrera et al.(2016)
FOXC1_S131L 		0.726 0.910
FOXC1
M00259_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 PBM
Barrera et al.(2016)
FOXC1_S82T 		0.726 0.910
FOXC1
M00254_2.00 		Homo sapiens
RRTAAACANN
NNTGTTTAYY		 PBM
Barrera et al.(2016)
FOXC1_I126M 		0.702 0.910
Foxc2
M00796_2.00 		Mus musculus
HNNRHMAAYA
TRTTKDYNND		 PBM
Weirauch et al.(2013)
pTH3796 		0.694 0.896
FOXC2
M03036_2.00 		Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN		 SELEX
Jolma et al.(2013)
FOXC2_1 		0.694 0.896
FOXC2
M03037_2.00 		Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY		 SELEX
Jolma et al.(2013)
FOXC2_2 		0.694 0.896
FOXC2
M03038_2.00 		Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW		 SELEX
Jolma et al.(2013)
FOXC2_3 		0.694 0.896
FOXC2
M04841_2.00 		Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN		 SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1 		0.694 0.896
FOXC2
M04842_2.00 		Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY		 SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2 		0.694 0.896
FOXC2
M10559_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FKHL14_Q2 		0.694 0.896
FOXC2
M04843_2.00 		Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN		 SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1 		0.694 0.896
FOXC2
M04844_2.00 		Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB		 SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2 		0.694 0.896
let-381
M00664_2.00 		Caenorhabditis elegans
RTAAACAW
WTGTTTAY		 PBM
Narasimhan et al.(2015)
pTH9057 		0.684 0.612
foxe3
M01228_2.00 		Xenopus tropicalis
WNNVHHMAYW
WRTKDDBNNW		 PBM
Lambert et al.(2019)
pTH9824 		0.679 0.687
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000036394 Forkhead 68 152

Links

Other Forkhead family TFs
Other Callithrix jacchus TFs

245 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action