CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FOXB2
(
Homo sapiens
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSG00000204612
T185803_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxb1
M01983_2.00
Mus musculus
TRTTKAYWYW
WRWRTMAAYA
PBM
Weirauch et al.(2014)
pTH2808
0.874
0.930
FOXB1
M03028_2.00
Homo sapiens
GAATGACACRGCKV
BMGCYGTGTCATTC
SELEX
Jolma et al.(2013)
FOXB1_1
0.874
0.930
FOXB1
M03029_2.00
Homo sapiens
WRWGTMAATATTKACWYW
WRWGTMAATATTKACWYW
SELEX
Jolma et al.(2013)
FOXB1_2
0.874
0.930
FOXB1
M03030_2.00
Homo sapiens
WTRTTKACWTW
WAWGTMAAYAW
SELEX
Jolma et al.(2013)
FOXB1_3
0.874
0.930
FOXB1
M03031_2.00
Homo sapiens
NTRTTTACW
WGTAAAYAN
SELEX
Jolma et al.(2013)
FOXB1_4
0.874
0.930
FOXB1
M04837_2.00
Homo sapiens
NWRDGYMAATATTKRCWYWD
HWRWGYMAATATTKRCHYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_HT-SELEX
0.874
0.930
FOXB1
M04838_2.00
Homo sapiens
NWRNGYMAATATTKRCDYWD
HWRHGYMAATATTKRCNYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_Methyl-HT-SELEX
0.874
0.930
fd96Ca
M03743_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW
WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fd96Ca_1
0.855
0.837
lin-31
M00665_2.00
Caenorhabditis elegans
NWRTAAAYANN
NNTRTTTAYWN
PBM
Narasimhan et al.(2015)
pTH9116
0.783
0.767
fkh
M03734_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW
WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fkh_1
0.672
0.721
fkh
M03735_2.00
Drosophila melanogaster
HWASAATAAYAWT
AATRTTATTSTWD
SELEX
Nitta et al.(2015)
fkh_2
0.672
0.721
fkh
M06473_2.00
Drosophila melanogaster
NTRDDYAAACA
TGTTTRHHYAN
B1H
Mathelier et al.(2014)
MA0446.1
0.672
0.721
fkh
M06194_2.00
Drosophila melanogaster
NTRDDYAAACA
TGTTTRHHYAN
B1H
Zhu et al.(2011)
fkh_NAR_FBgn0000659
0.672
0.721
fkh
M08200_2.00
Drosophila melanogaster
NTRDDYAAACA
TGTTTRHHYAN
ChIP-seq
Contrino et al.(2012)
Mf15
0.672
0.721
fkh
M09668_2.00
Drosophila melanogaster
TRTTTRCAHAAG
CTTDTGYAAAYA
Misc
Kulakovskiy et al.(2009)
fkh
0.672
0.721
Foxa2
M00162_2.00
Mus musculus
GTAAAYAW
WTRTTTAC
PBM
Badis et al.(2009)
Foxa2_2830
0.665
0.721
FOXA2
M04815_2.00
Homo sapiens
NHVNRYMAATATTKACNNDN
NHNNGTMAATATTKRYNBDN
SELEX
Yin et al.(2017)
FOXA2_eDBD_HT-SELEX
0.665
0.721
Foxa2
M08121_2.00
Mus musculus
TRTTTACWYWDN
NHWRWGTAAAYA
ChIP-seq
Mathelier et al.(2014)
MA0047.2
0.665
0.721
FOXA2
M07959_2.00
Homo sapiens
NNWRWGYAAAYANNN
NNNTRTTTRCWYWNN
ChIP-seq
Gerstein et al.(2012)
HepG2_FOXA2_HudsonAlpha
0.665
0.721
FOXA2
M09088_2.00
Homo sapiens
NHWRWGTAAACA
TGTTTACWYWDN
Misc
Kulakovskiy et al.(2013)
FOXA2_HUMAN.H11MO.0.A
0.665
0.721
Foxa2
M09104_2.00
Mus musculus
BNHTRTTKACWYW
WRWGTMAAYADNV
Misc
Kulakovskiy et al.(2013)
FOXA2_MOUSE.H11MO.0.A
0.665
0.721
FOXA2
M09542_2.00
Homo sapiens
WVWGTMAACANV
BNTGTTKACWBW
Misc
Heinz et al.(2010)
Liver-Foxa2_GSE25694
0.665
0.721
FOXA2
M10540_2.00
Homo sapiens
WAARYAAAYADKNMV
BKNMHTRTTTRYTTW
Transfac
Matys et al.(2006)
V$HNF3B_01
0.665
0.721
FOXA2
M10541_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3B_Q6
0.665
0.721
AAA20679
M10575_2.00
Xenopus laevis
WNWGTMAACAWWMW
WKWWTGTTKACWNW
Transfac
Matys et al.(2006)
V$XFD3_01
0.665
0.721
FOXA2
M04816_2.00
Homo sapiens
NWRNRYMAATATTKACWNWN
NWNWGTMAATATTKRYNYWN
SELEX
Yin et al.(2017)
FOXA2_eDBD_Methyl-HT-SELEX
0.665
0.721
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000365898
Forkhead
13
102
KPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSF
Links
Other
Forkhead
family TFs
Other
Homo sapiens
TFs
403 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANAC050
Arabidopsis thaliana
AT3G10480
D
0.000
BGIOSGA009316
Oryza indica
BGIOSGA009316
I
0.000
BGIOSGA026481
Oryza indica
BGIOSGA026481
I
0.000
Bo1g143850
Brassica oleracea
Bo1g143850
I
0.000
Bostr.22252s0011
Boechera stricta
Bostr.22252s0011
I
0.000
Bostr.22252s0012
Boechera stricta
Bostr.22252s0012
I
0.000
Bra034118
Brassica rapa
Bra034118
I
0.000
BRADI3G12470
Brachypodium distachyon
BRADI3G12470
I
0.000
BRADI3G56080
Brachypodium distachyon
BRADI3G56080
I
0.000
Cagra.0834s0028
Capsella grandiflora
Cagra.0834s0028
I
0.000
Cagra.0834s0029
Capsella grandiflora
Cagra.0834s0029
I
0.000
Carubv10013564m.g
Capsella rubella
Carubv10013564m.g
I
0.000
Carubv10013694m.g
Capsella rubella
Carubv10013694m.g
I
0.000
Ciclev10031606m.g
Citrus clementina
Ciclev10031606m.g
I
0.000
F775_27564
Aegilops tauschii
F775_27564
I
0.000
ANAC050
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_3000864
I
0.000
ANAC052
Arabidopsis lyrata
fgenesh2_kg.3__1083__AT3G10490.2
I
0.000
Gorai.009G309300
Gossypium raimondii
Gorai.009G309300
I
0.000
GRMZM2G113950
Zea mays
GRMZM2G113950
I
0.000
GRMZM2G125777
Zea mays
GRMZM2G125777
I
0.000
LPERR02G31180
Leersia perrieri
LPERR02G31180
N
0.000
LPERR08G20450
Leersia perrieri
LPERR08G20450
I
0.000
mgf000623m
Mimulus guttatus
mgf000623m
I
0.000
OB08G30590
Oryza brachyantha
OB08G30590
I
0.000
OBART02G37700
Oryza barthii
OBART02G37700
I
0.000
OBART08G23760
Oryza barthii
OBART08G23760
I
0.000
OGLUM02G38880
Oryza glumaepatula
OGLUM02G38880
I
0.000
OGLUM08G25240
Oryza glumaepatula
OGLUM08G25240
I
0.000
OLONG_023179
Oryza longistaminata
OLONG_023179
I
0.000
OMERI08G18580
Oryza meridionalis
OMERI08G18580
I
0.000
ONIVA02G40500
Oryza nivara
ONIVA02G40500
I
0.000
ONIVA08G26810
Oryza nivara
ONIVA08G26810
I
0.000
OPUNC02G34910
Oryza punctata
OPUNC02G34910
I
0.000
OPUNC08G21700
Oryza punctata
OPUNC08G21700
I
0.000
orange1.1g014130m.g
Citrus sinensis
orange1.1g014130m.g
I
0.000
ORGLA02G0329400
Oryza glaberrima
ORGLA02G0329400
I
0.000
ORGLA08G0191600
Oryza glaberrima
ORGLA08G0191600
I
0.000
ORUFI02G39260
Oryza rufipogon
ORUFI02G39260
I
0.000
ORUFI08G26250
Oryza rufipogon
ORUFI08G26250
I
0.000
OS02G0822400
Oryza sativa
OS02G0822400
I
0.000
OS08G0562200
Oryza sativa
OS08G0562200
I
0.000
Pavir.Aa00085
Panicum virgatum
Pavir.Aa00085
I
0.000
Pavir.Ab03009
Panicum virgatum
Pavir.Ab03009
I
0.000
Pavir.Fa00048
Panicum virgatum
Pavir.Fa00048
I
0.000
Pavir.Fb02407
Panicum virgatum
Pavir.Fb02407
I
0.000
PGSC0003DMG402023373
Solanum tuberosum
PGSC0003DMG402023373
I
0.000
Sb04g037720
Sorghum bicolor
Sb04g037720
I
0.000
Sb07g023900
Sorghum bicolor
Sb07g023900
I
0.000
Si013361m.g
Setaria italica
Si013361m.g
I
0.000
Si016620m.g
Setaria italica
Si016620m.g
I
0.000
Solyc05g055470.2
Solanum lycopersicum
Solyc05g055470.2
I
0.000
Thhalv10020717m.g
Eutrema salsugineum
Thhalv10020717m.g
I
0.000
Thhalv10020745m.g
Eutrema salsugineum
Thhalv10020745m.g
I
0.000
Traes_6AL_8BA1FF8B2
Triticum aestivum
Traes_6AL_8BA1FF8B2
I
0.000
Traes_7BL_FB5FAC1E8
Triticum aestivum
Traes_7BL_FB5FAC1E8
I
0.000
Traes_7DS_9FBF54244
Triticum aestivum
Traes_7DS_9FBF54244
I
0.000
TRIUR3_33524
Triticum urartu
TRIUR3_33524
I
0.000