CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FOXK1
(
Macaca mulatta
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSMMUG00000011227
T186238_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXK1
M01977_2.00
Homo sapiens
NNRWMMAYAN
NTRTKKWYNN
PBM
Weirauch et al.(2014)
pTH6108
0.857
1.000
FOXK1
M03025_2.00
Homo sapiens
CGGACACAAT
ATTGTGTCCG
SELEX
Jolma et al.(2013)
FOXK1_1
0.857
1.000
FOXK1
M04825_2.00
Homo sapiens
NDNRTMAAYAN
NTRTTKAYNHN
SELEX
Yin et al.(2017)
FOXK1_eDBD_HT-SELEX
0.857
1.000
FOXK1
M08120_2.00
Homo sapiens
NNNGTAAACANVNN
NNBNTGTTTACNNN
ChIP-seq
Mathelier et al.(2014)
MA0852.2
0.857
1.000
FOXK1
M09094_2.00
Homo sapiens
VNDRDAAACA
TGTTTHYHNB
Misc
Kulakovskiy et al.(2013)
FOXK1_HUMAN.H11MO.0.A
0.857
1.000
FOXK1
M04826_2.00
Homo sapiens
NWYRYAAWYAD
HTRWTTRYRWN
SELEX
Yin et al.(2017)
FOXK1_eDBD_Methyl-HT-SELEX
0.857
1.000
Foxk1
M00163_2.00
Mus musculus
RWMAACAA
TTGTTKWY
PBM
Badis et al.(2009)
Foxk1_2323
0.857
0.988
Foxk1
M03061_2.00
Mus musculus
CGGACACAATC
GATTGTGTCCG
SELEX
Jolma et al.(2013)
Foxk1_1
0.857
0.988
Foxk1
M03062_2.00
Mus musculus
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
Foxk1_2
0.857
0.988
Foxk1
M09113_2.00
Mus musculus
NNGDMAACAVV
BBTGTTKHCNN
Misc
Kulakovskiy et al.(2013)
FOXK1_MOUSE.H11MO.0.A
0.857
0.988
SPU_025010
M01988_2.00
Strongylocentrotus purpuratus
NNVNHHAYAN
NTRTDDNBNN
PBM
Weirauch et al.(2014)
pTH6641
0.845
0.895
FOXK2
M08118_2.00
Homo sapiens
NNRTAAACANN
NNTGTTTAYNN
ChIP-seq
Mathelier et al.(2014)
MA1103.1
0.828
0.884
FOXI1
M03026_2.00
Homo sapiens
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
FOXI1_1
0.700
0.512
FOXI1
M03027_2.00
Homo sapiens
RTGTKTACGGTAAACAA
TTGTTTACCGTAMACAY
SELEX
Jolma et al.(2013)
FOXI1_2
0.700
0.512
FOXI1
M04827_2.00
Homo sapiens
NNNNNRTMAACAN
NTGTTKAYNNNNN
SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX
0.700
0.512
FOXI1
M04829_2.00
Homo sapiens
AAYGTAAACAMW
WKTGTTTACRTT
SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX
0.700
0.512
FOXI1
M09095_2.00
Homo sapiens
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B
0.700
0.512
Foxi1
M09109_2.00
Mus musculus
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B
0.700
0.512
FOXI1
M10556_2.00
Homo sapiens
HAWAYAAAYAHVH
DBDTRTTTRTWTD
Transfac
Matys et al.(2006)
V$HFH3_01
0.700
0.512
FOXI1
M04828_2.00
Homo sapiens
NWWVHRTAAACAH
DTGTTTAYDBWWN
SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX
0.700
0.512
FOXI1
M04830_2.00
Homo sapiens
AAYRTAAACAAW
WTTGTTTAYRTT
SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX
0.700
0.512
FOXJ3
M03046_2.00
Homo sapiens
RTAAAVAA
TTBTTTAY
SELEX
Jolma et al.(2013)
FOXJ3_1
0.679
0.558
FOXJ3
M03047_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_2
0.679
0.558
FOXJ3
M03048_2.00
Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_3
0.679
0.558
FOXJ3
M02736_2.00
Homo sapiens
AAACAATAAACA
TGTTTATTGTTT
SELEX
Jolma et al.(2010)
FOXJ3_dimer
0.679
0.558
FOXJ3
M02737_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2010)
FOXJ3_monomer
0.679
0.558
FOXJ3
M04859_2.00
Homo sapiens
DYGTMAACAH
DTGTTKACRH
SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX
0.679
0.558
FOXJ3
M09098_2.00
Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A
0.679
0.558
FOXJ3
M04860_2.00
Homo sapiens
RYGTMAACAH
DTGTTKACRY
SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX
0.679
0.558
SPU_007644
M01987_2.00
Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN
PBM
Weirauch et al.(2014)
pTH6497
0.678
0.558
Foxj3
M00160_2.00
Mus musculus
NRTAAACAHN
NDTGTTTAYN
PBM
Badis et al.(2009)
Foxj3_0982
0.678
0.558
Foxj3
M01981_2.00
Mus musculus
VNHHAYANN
NNTRTDDNB
PBM
Weirauch et al.(2014)
pTH6591
0.678
0.558
Foxj3
M03055_2.00
Mus musculus
ACGGACACAAT
ATTGTGTCCGT
SELEX
Jolma et al.(2013)
Foxj3_1
0.678
0.558
Foxj3
M03056_2.00
Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
Foxj3_2
0.678
0.558
Foxj3
M03057_2.00
Mus musculus
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_3
0.678
0.558
Foxj3
M03058_2.00
Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_4
0.678
0.558
Foxj3
M09102_2.00
Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
0.678
0.558
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000014713
Forkhead
147
236
KPPFSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAF
Links
Other
Forkhead
family TFs
Other
Macaca mulatta
TFs
600 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29814.m000739
Ricinus communis
29814.m000739
I
ABI4
Arabidopsis lyrata
Al_scaffold_0004_2621
I
AMTR_s00007p00053050
Amborella trichopoda
AMTR_s00007p00053050
I
ABI4
Arabidopsis thaliana
AT2G40220
I
BGIOSGA018232
Oryza indica
BGIOSGA018232
I
Bo3g034810
Brassica oleracea
Bo3g034810
I
Bo4g025410
Brassica oleracea
Bo4g025410
I
Bostr.23794s0036
Boechera stricta
Bostr.23794s0036
I
Bra000178
Brassica rapa
Bra000178
I
Bra004978
Brassica rapa
Bra004978
I
Cagra.7053s0005
Capsella grandiflora
Cagra.7053s0005
I
Carubv10025253m.g
Capsella rubella
Carubv10025253m.g
I
cassava20838.m1
Manihot esculenta
cassava20838.m1
I
cassava41265.m1
Manihot esculenta
cassava41265.m1
I
Ca_12465
Cicer arietinum
Ca_12465
I
chr2.CM0002.60.nc
Lotus japonicus
chr2.CM0002.60.nc
I
Ciclev10033578m.g
Citrus clementina
Ciclev10033578m.g
I
Cla006708
Citrullus lanatus
Cla006708
I
evm.TU.supercontig_1288.2
Carica papaya
evm.TU.supercontig_1288.2
I
gene21003-v1.0-hybrid
Fragaria vesca
gene21003-v1.0-hybrid
I
GLYMA02G43240
Glycine max
GLYMA02G43240
I
GLYMA14G06290
Glycine max
GLYMA14G06290
I
Gorai.011G291900
Gossypium raimondii
Gorai.011G291900
I
abi4
Zea mays
GRMZM2G093595
D
GSMUA_Achr3G10100_001
Musa acuminata
GSMUA_Achr3G10100_001
I
GSMUA_Achr5G07400_001
Musa acuminata
GSMUA_Achr5G07400_001
I
GSMUA_Achr9G18060_001
Musa acuminata
GSMUA_Achr9G18060_001
I
LPERR05G10140
Leersia perrieri
LPERR05G10140
I
Lus10009834.g
Linum usitatissimum
Lus10009834.g
I
Lus10040944.g
Linum usitatissimum
Lus10040944.g
I
MDP0000225376
Malus domestica
MDP0000225376
I
MDP0000628484
Malus domestica
MDP0000628484
I
mgf024416m
Mimulus guttatus
mgf024416m
I
MTR_5g082950
Medicago truncatula
MTR_5g082950
I
OGLUM05G13600
Oryza glumaepatula
OGLUM05G13600
I
OMERI05G11540
Oryza meridionalis
OMERI05G11540
I
ONIVA05G13490
Oryza nivara
ONIVA05G13490
I
OPUNC05G11000
Oryza punctata
OPUNC05G11000
I
orange1.1g038194m.g
Citrus sinensis
orange1.1g038194m.g
I
ORGLA05G0109500
Oryza glaberrima
ORGLA05G0109500
I
ABI4
Oryza sativa
OS05G0351200
I
Pavir.J29572
Panicum virgatum
Pavir.J29572
I
Pavir.J33237
Panicum virgatum
Pavir.J33237
I
Pavir.J38620
Panicum virgatum
Pavir.J38620
I
PGSC0003DMG400041883
Solanum tuberosum
PGSC0003DMG400041883
I
Pm018953
Prunus mume
Pm018953
I
POPTR_0008s07120
Populus trichocarpa
POPTR_0008s07120
I
POPTR_0010s19370
Populus trichocarpa
POPTR_0010s19370
I
PRUPE_ppa015230mg
Prunus persica
PRUPE_ppa015230mg
I
SapurV1A.0061s0480
Salix purpurea
SapurV1A.0061s0480
I
SapurV1A.0650s0090
Salix purpurea
SapurV1A.0650s0090
I
Sb09g016550
Sorghum bicolor
Sb09g016550
I
SELMODRAFT_420500
Selaginella moellendorffii
SELMODRAFT_420500
I
SELMODRAFT_427925
Selaginella moellendorffii
SELMODRAFT_427925
I
TCM_042471
Theobroma cacao
TCM_042471
I
Thhalv10017614m.g
Eutrema salsugineum
Thhalv10017614m.g
I
ABI4
Vitis vinifera
VIT_13s0067g01400
I