CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Foxp2
(
Mus musculus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSMUSG00000029563
T186345_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
(Direct)
(Direct)
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.829
1.000
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.829
1.000
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.829
1.000
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.751
0.901
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.751
0.901
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.751
0.901
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.751
0.901
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.751
0.901
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.751
0.901
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.751
0.901
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.751
0.901
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.751
0.901
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.751
0.901
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.725
0.728
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA
TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.725
0.728
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.725
0.728
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.725
0.728
SPU_025010
M01988_2.00
Strongylocentrotus purpuratus
NNVNHHAYAN
NTRTDDNBNN
PBM
Weirauch et al.(2014)
pTH6641
0.667
0.457
For this family, TFs with SR scores >
0.664
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00792_2.00
Forkhead
174
258
RPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKI
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000031545
Forkhead
503
587
RPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKI
ENSMUSP00000111132
Forkhead
482
566
RPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKI
ENSMUSP00000111134
Forkhead
528
612
RPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKI
ENSMUSP00000111137
Forkhead
503
587
RPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKI
Links
Other
Forkhead
family TFs
Other
Mus musculus
TFs
396 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R001146
Calypte anna
Aan_R001146
I
Aan_R004737
Calypte anna
Aan_R004737
I
Aan_R013329
Calypte anna
Aan_R013329
I
Afo_R005490
Aptenodytes forsteri
Afo_R005490
I
Alligator_sinensis_CCG012713.1
Alligator sinensis
Alligator_sinensis_CCG012713.1
I
Alligator_sinensis_CCG015231.1
Alligator sinensis
Alligator_sinensis_CCG015231.1
I
Brh_R004487
Buceros rhinoceros
Brh_R004487
I
CGI_10005914
Crassostrea gigas
CGI_10005914
I
Cmyd_10005629
Chelonia mydas
Cmyd_10005629
I
Cmyd_10006683
Chelonia mydas
Cmyd_10006683
I
Cmyd_10007257
Chelonia mydas
Cmyd_10007257
I
Cmyd_10014386
Chelonia mydas
Cmyd_10014386
I
DAPPUDRAFT_59366
Daphnia pulex
DAPPUDRAFT_59366
I
TBX18
Anolis carolinensis
ENSACAG00000003859
I
TBX20
Anolis carolinensis
ENSACAG00000007473
I
ENSAMEG00000005830
Ailuropoda melanoleuca
ENSAMEG00000005830
I
ENSAMEG00000008160
Ailuropoda melanoleuca
ENSAMEG00000008160
I
ENSAMEG00000015853
Ailuropoda melanoleuca
ENSAMEG00000015853
I
ENSAMXG00000004418
Astyanax mexicanus
ENSAMXG00000004418
I
ENSAMXG00000005724
Astyanax mexicanus
ENSAMXG00000005724
I
ENSAMXG00000013612
Astyanax mexicanus
ENSAMXG00000013612
I
ENSAPLG00000009645
Anas platyrhynchos
ENSAPLG00000009645
I
TBX20
Bos taurus
ENSBTAG00000017541
I
TBX18
Bos taurus
ENSBTAG00000018161
I
TBX22
Bos taurus
ENSBTAG00000048060
I
TBX18
Canis familiaris
ENSCAFG00000002987
I
TBX15
Canis familiaris
ENSCAFG00000009976
I
TBX20
Canis familiaris
ENSCAFG00000028536
I
tbx20
Ciona intestinalis
ENSCING00000005267
I
TBX15
Callithrix jacchus
ENSCJAG00000005662
I
TBX22
Callithrix jacchus
ENSCJAG00000009617
I
TBX20
Callithrix jacchus
ENSCJAG00000012232
I
TBX18
Callithrix jacchus
ENSCJAG00000015218
I
TBX15
Cavia porcellus
ENSCPOG00000000615
I
ENSCPOG00000008004
Cavia porcellus
ENSCPOG00000008004
I
TBX20
Cavia porcellus
ENSCPOG00000015229
I
ENSCSAG00000001712
Chlorocebus sabaeus
ENSCSAG00000001712
I
ENSCSAG00000010713
Chlorocebus sabaeus
ENSCSAG00000010713
I
ENSCSAG00000014936
Chlorocebus sabaeus
ENSCSAG00000014936
I
ENSCSAG00000017375
Chlorocebus sabaeus
ENSCSAG00000017375
I
tbx15
Danio rerio
ENSDARG00000002582
I
tbx18
Danio rerio
ENSDARG00000036930
I
tbx22
Danio rerio
ENSDARG00000091748
I
TBX15
Dasypus novemcinctus
ENSDNOG00000003930
I
TBX20
Dasypus novemcinctus
ENSDNOG00000004142
I
TBX18
Dasypus novemcinctus
ENSDNOG00000049259
I
TBX18
Equus caballus
ENSECAG00000005787
I
TBX22
Equus caballus
ENSECAG00000014426
I
TBX20
Equus caballus
ENSECAG00000018182
I
TBX15
Equus caballus
ENSECAG00000023325
I
TBX15
Erinaceus europaeus
ENSEEUG00000003919
I
TBX20
Erinaceus europaeus
ENSEEUG00000010135
I
TBX18
Erinaceus europaeus
ENSEEUG00000013766
I
TBX18
Echinops telfairi
ENSETEG00000006457
I
TBX22
Echinops telfairi
ENSETEG00000006623
I
TBX20
Echinops telfairi
ENSETEG00000012771
I
ENSFALG00000002727
Ficedula albicollis
ENSFALG00000002727
I
ENSFALG00000002783
Ficedula albicollis
ENSFALG00000002783
I
ENSFALG00000005042
Ficedula albicollis
ENSFALG00000005042
I
TBX22
Felis catus
ENSFCAG00000002301
I
TBX18
Felis catus
ENSFCAG00000012657
I
TBX20
Felis catus
ENSFCAG00000013004
I
TBX15
Felis catus
ENSFCAG00000023731
I
TBX15
Homo sapiens
ENSG00000092607
D
TBX18
Homo sapiens
ENSG00000112837
D
TBX22
Homo sapiens
ENSG00000122145
D
TBX20
Homo sapiens
ENSG00000164532
D
tbx18
Gasterosteus aculeatus
ENSGACG00000005602
I
TBX22
Gallus gallus
ENSGALG00000004093
I
ENSGALG00000012151
Gallus gallus
ENSGALG00000012151
I
ENSGALG00000014776
Gallus gallus
ENSGALG00000014776
I
ENSGALG00000015834
Gallus gallus
ENSGALG00000015834
I
TBX22
Gorilla gorilla
ENSGGOG00000008990
I
TBX15
Gorilla gorilla
ENSGGOG00000013468
I
TBX20
Gorilla gorilla
ENSGGOG00000026618
I
TBX18
Gorilla gorilla
ENSGGOG00000027982
I
ENSGMOG00000003658
Gadus morhua
ENSGMOG00000003658
I
ENSLACG00000006381
Latimeria chalumnae
ENSLACG00000006381
I
ENSLACG00000015964
Latimeria chalumnae
ENSLACG00000015964
I
TBX22
Loxodonta africana
ENSLAFG00000001881
I
TBX20
Loxodonta africana
ENSLAFG00000012790
I
TBX18
Loxodonta africana
ENSLAFG00000015009
I
TBX15
Loxodonta africana
ENSLAFG00000018452
I
ENSLOCG00000011023
Lepisosteus oculatus
ENSLOCG00000011023
I
ENSLOCG00000014991
Lepisosteus oculatus
ENSLOCG00000014991
I
ENSLOCG00000016254
Lepisosteus oculatus
ENSLOCG00000016254
I
TBX22
Meleagris gallopavo
ENSMGAG00000001700
I
TBX20
Meleagris gallopavo
ENSMGAG00000012040
I
TBX18
Meleagris gallopavo
ENSMGAG00000013715
I
TBX15
Meleagris gallopavo
ENSMGAG00000014235
I
TBX22
Microcebus murinus
ENSMICG00000009019
I
TBX15
Myotis lucifugus
ENSMLUG00000002958
I
TBX18
Myotis lucifugus
ENSMLUG00000011326
I
TBX20
Myotis lucifugus
ENSMLUG00000015517
I
TBX22
Myotis lucifugus
ENSMLUG00000016826
I
TBX22
Macaca mulatta
ENSMMUG00000009102
I
TBX15
Macaca mulatta
ENSMMUG00000009257
I
TBX18
Macaca mulatta
ENSMMUG00000010599
I
TBX20
Macaca mulatta
ENSMMUG00000012549
I
TBX20
Monodelphis domestica
ENSMODG00000000085
I
TBX22
Monodelphis domestica
ENSMODG00000004255
I
TBX15
Monodelphis domestica
ENSMODG00000005319
I
TBX18
Monodelphis domestica
ENSMODG00000018361
I
ENSMPUG00000001549
Mustela putorius furo
ENSMPUG00000001549
I
ENSMPUG00000005346
Mustela putorius furo
ENSMPUG00000005346
I
ENSMPUG00000007865
Mustela putorius furo
ENSMPUG00000007865
I
ENSMPUG00000012619
Mustela putorius furo
ENSMPUG00000012619
I
Tbx15
Mus musculus
ENSMUSG00000027868
I
Tbx22
Mus musculus
ENSMUSG00000031241
I
Tbx20
Mus musculus
ENSMUSG00000031965
D
Tbx18
Mus musculus
ENSMUSG00000032419
I
ENSNLEG00000001606
Nomascus leucogenys
ENSNLEG00000001606
I
ENSNLEG00000002116
Nomascus leucogenys
ENSNLEG00000002116
I
ENSNLEG00000005347
Nomascus leucogenys
ENSNLEG00000005347
I
ENSNLEG00000012797
Nomascus leucogenys
ENSNLEG00000012797
I
TBX18
Ornithorhynchus anatinus
ENSOANG00000000556
I
ENSOANG00000006968
Ornithorhynchus anatinus
ENSOANG00000006968
I
ENSOARG00000000455
Ovis aries
ENSOARG00000000455
I
ENSOARG00000005153
Ovis aries
ENSOARG00000005153
I
ENSOARG00000013317
Ovis aries
ENSOARG00000013317
I
ENSOARG00000020376
Ovis aries
ENSOARG00000020376
I
TBX18
Oryctolagus cuniculus
ENSOCUG00000002026
I
TBX20
Oryctolagus cuniculus
ENSOCUG00000007422
I
TBX15
Oryctolagus cuniculus
ENSOCUG00000012320
I
TBX22
Oryctolagus cuniculus
ENSOCUG00000013685
I
TBX22
Otolemur garnettii
ENSOGAG00000002759
I
TBX18
Otolemur garnettii
ENSOGAG00000004300
I
TBX15
Otolemur garnettii
ENSOGAG00000007282
I
TBX20
Otolemur garnettii
ENSOGAG00000010338
I
ENSONIG00000001051
Oreochromis niloticus
ENSONIG00000001051
I
ENSONIG00000003732
Oreochromis niloticus
ENSONIG00000003732
I
ENSONIG00000015685
Oreochromis niloticus
ENSONIG00000015685
I
ENSONIG00000017642
Oreochromis niloticus
ENSONIG00000017642
I
TBX15
Ochotona princeps
ENSOPRG00000004847
I
TBX20
Ochotona princeps
ENSOPRG00000013626
I
ENSP00000358437
Macaca fascicularis
ENSP00000358437
I
ENSP00000358437-D1
Bos grunniens
ENSP00000358437-D1
I
ENSP00000358677
Macaca fascicularis
ENSP00000358677
I
ENSP00000358677-D1
Bos grunniens
ENSP00000358677-D1
I
ENSP00000362390
Macaca fascicularis
ENSP00000362390
I
ENSP00000362390-D1
Bos grunniens
ENSP00000362390-D1
I
ENSP00000386170
Macaca fascicularis
ENSP00000386170
I
ENSP00000386170-D1
Bos grunniens
ENSP00000386170-D1
I
ENSPANG00000004604
Papio anubis
ENSPANG00000004604
I
ENSPANG00000007074
Papio anubis
ENSPANG00000007074
I
ENSPANG00000025094
Papio anubis
ENSPANG00000025094
I
ENSPANG00000025136
Papio anubis
ENSPANG00000025136
I
TBX15
Procavia capensis
ENSPCAG00000016333
I
ENSPFOG00000000670
Poecilia formosa
ENSPFOG00000000670
I
ENSPFOG00000003081
Poecilia formosa
ENSPFOG00000003081
I
ENSPFOG00000018033
Poecilia formosa
ENSPFOG00000018033
I
ENSPPYG00000000968
Pongo abelii
ENSPPYG00000000968
I
ENSPPYG00000016815
Pongo abelii
ENSPPYG00000016815
I
ENSPPYG00000017641
Pongo abelii
ENSPPYG00000017641
I
ENSPPYG00000020504
Pongo abelii
ENSPPYG00000020504
I
ENSPSIG00000005286
Pelodiscus sinensis
ENSPSIG00000005286
I
ENSPSIG00000013362
Pelodiscus sinensis
ENSPSIG00000013362
I
ENSPSIG00000016149
Pelodiscus sinensis
ENSPSIG00000016149
I
ENSPSIG00000017560
Pelodiscus sinensis
ENSPSIG00000017560
I
TBX15
Pan troglodytes
ENSPTRG00000001172
I
TBX18
Pan troglodytes
ENSPTRG00000018390
I
TBX20
Pan troglodytes
ENSPTRG00000019076
I
TBX22
Pan troglodytes
ENSPTRG00000022058
I
TBX22
Pteropus vampyrus
ENSPVAG00000008832
I
TBX15
Pteropus vampyrus
ENSPVAG00000015733
I
TBX18
Pteropus vampyrus
ENSPVAG00000016771
I
Tbx22
Rattus norvegicus
ENSRNOG00000002346
I
Tbx18
Rattus norvegicus
ENSRNOG00000010685
I
Tbx20
Rattus norvegicus
ENSRNOG00000016181
I
Tbx15
Rattus norvegicus
ENSRNOG00000019565
I
ENSSARG00000007424
Sorex araneus
ENSSARG00000007424
I
ENSSHAG00000010820
Sarcophilus harrisii
ENSSHAG00000010820
I
ENSSHAG00000012785
Sarcophilus harrisii
ENSSHAG00000012785
I
ENSSHAG00000016356
Sarcophilus harrisii
ENSSHAG00000016356
I
TBX18
Sus scrofa
ENSSSCG00000004290
I
ENSSSCG00000006723
Sus scrofa
ENSSSCG00000006723
I
TBX22
Sus scrofa
ENSSSCG00000012449
I
TBX20
Sus scrofa
ENSSSCG00000016662
I
ENSSTOG00000003725
Ictidomys tridecemlineatus
ENSSTOG00000003725
I
ENSSTOG00000013040
Ictidomys tridecemlineatus
ENSSTOG00000013040
I
ENSSTOG00000020544
Ictidomys tridecemlineatus
ENSSTOG00000020544
I
TBX18
Tupaia belangeri
ENSTBEG00000007925
I
TBX22
Tupaia belangeri
ENSTBEG00000010144
I
TBX15
Tupaia belangeri
ENSTBEG00000014589
I
TBX22
Taeniopygia guttata
ENSTGUG00000002573
I
TBX20
Taeniopygia guttata
ENSTGUG00000005375
I
TBX18
Taeniopygia guttata
ENSTGUG00000012504
I
ENSTGUG00000013354
Taeniopygia guttata
ENSTGUG00000013354
I
tbx18
Tetraodon nigroviridis
ENSTNIG00000009690
I
tbx15
Tetraodon nigroviridis
ENSTNIG00000015660
I
tbx18
Takifugu rubripes
ENSTRUG00000001419
I
tbx15
Takifugu rubripes
ENSTRUG00000003945
I
TBX22
Takifugu rubripes
ENSTRUG00000010801
I
ENSTSYG00000007267
Tarsius syrichta
ENSTSYG00000007267
I
TBX18
Tursiops truncatus
ENSTTRG00000005713
I
TBX15
Tursiops truncatus
ENSTTRG00000011006
I
TBX22
Tursiops truncatus
ENSTTRG00000014058
I
TBX20
Tursiops truncatus
ENSTTRG00000016622
I
TBX18
Vicugna pacos
ENSVPAG00000006869
I
ENSVPAG00000010265
Vicugna pacos
ENSVPAG00000010265
I
TBX22
Vicugna pacos
ENSVPAG00000011942
I
ENSXMAG00000010831
Xiphophorus maculatus
ENSXMAG00000010831
I
ENSXMAG00000015062
Xiphophorus maculatus
ENSXMAG00000015062
I
estExt_fgenesh2_pg.C_1050030
Branchiostoma floridae
estExt_fgenesh2_pg.C_1050030
I
e_gw.418.20.1
Branchiostoma floridae
e_gw.418.20.1
I
GA19742
Drosophila pseudoobscura
FBgn0079738
I
GF14392
Drosophila ananassae
FBgn0091419
I
GG25073
Drosophila erecta
FBgn0117202
I
GI17986
Drosophila mojavensis
FBgn0140726
I
GM18548
Drosophila sechellia
FBgn0173455
I
GD23341
Drosophila simulans
FBgn0194727
I
GJ19568
Drosophila virilis
FBgn0206710
I
GK15086
Drosophila willistoni
FBgn0217091
I
GE25417
Drosophila yakuba
FBgn0242487
I
mid
Drosophila melanogaster
FBgn0261963
D
Gfo_R000255
Geospiza fortis
Gfo_R000255
I
Gfo_R005492
Geospiza fortis
Gfo_R005492
I
LCUP000433
Lucilia cuprina
LCUP000433
I
MDOA009961
Musca domestica
MDOA009961
I
MDOA010319
Musca domestica
MDOA010319
I
Myotis_brandtii_Tbx15_10011211
Myotis brandtii
Myotis_brandtii_Tbx15_10011211
I
Myotis_brandtii_TBX18_10024963
Myotis brandtii
Myotis_brandtii_TBX18_10024963
I
Myotis_brandtii_Tbx20_10020109
Myotis brandtii
Myotis_brandtii_Tbx20_10020109
I
Myotis_brandtii_Tbx22_10010932
Myotis brandtii
Myotis_brandtii_Tbx22_10010932
I
NEMVEDRAFT_v1g88753
Nematostella vectensis
NEMVEDRAFT_v1g88753
I
Ogr00863
Ophisaurus gracilis
Ogr00863
I
Ogr03354
Ophisaurus gracilis
Ogr03354
I
Ogr10944
Ophisaurus gracilis
Ogr10944
I
Pvit_04171
Pogona vitticeps
Pvit_04171
I
Pvit_04496
Pogona vitticeps
Pvit_04496
I
Pvit_09354
Pogona vitticeps
Pvit_09354
I
SMAR008438
Strigamia maritima
SMAR008438
I
SNAPOd2T00017929001
Oikopleura dioica
SNAPOd2T00017929001
I
Tal_R000620
Tyto alba
Tal_R000620
I
TASK_0000456901
Taenia asiatica
TASK_0000456901
I
tbx15
Xenopus tropicalis
XB-GENE-483924
I
tbx18
Xenopus tropicalis
XB-GENE-489907
I
tbx22
Xenopus tropicalis
XB-GENE-994522
I