CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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foxm1
(
Oryzias latipes
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSORLG00000016140
T186677_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxm1
M01009_2.00
Mus musculus
NNYDWYNN
NNRWHRNN
PBM
Nakagawa et al.(2013)
Foxm1
0.737
0.795
FOXM1
M09085_2.00
Homo sapiens
NVWRDGYAAAYA
TRTTTRCHYWBN
Misc
Kulakovskiy et al.(2013)
FOXM1_HUMAN.H11MO.0.A
0.737
0.795
Foxm1
M09099_2.00
Mus musculus
NVWRDGYAAAYA
TRTTTRCHYWBN
Misc
Kulakovskiy et al.(2013)
FOXM1_MOUSE.H11MO.0.B
0.737
0.795
FOXM1
M10532_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXM1_01
0.737
0.795
Foxm1
M10568_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXM1_03
0.737
0.795
Foxm1
M10569_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXM1_04
0.737
0.795
FOXM1
M10533_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXM1_Q3_02
0.737
0.795
FOXM1
M10534_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXM1_Q3
0.737
0.795
FOXM1
M10535_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXM1_Q6
0.737
0.795
FOXM1
M01979_2.00
Meleagris gallopavo
RDAWRCAH
DTGYWTHY
PBM
Weirauch et al.(2014)
pTH8652
0.729
0.795
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000020197
Forkhead
210
298
RPPYSYMAMIQFAINSRKNRRMTLKEIYTWIEDHFPYYRQVAKPGWKNSIRHNLSLHDMFVRETAPDGKVSFWTIRPEANRCLTLDQVY
Links
Other
Forkhead
family TFs
Other
Oryzias latipes
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava8864.m1
Manihot esculenta
cassava8864.m1
I
Cla022990
Citrullus lanatus
Cla022990
I
Cucsa.353000
Cucumis sativus
Cucsa.353000
I
Cucsa.395470
Cucumis sativus
Cucsa.395470
I
Lus10007726.g
Linum usitatissimum
Lus10007726.g
N
Lus10018662.g
Linum usitatissimum
Lus10018662.g
I
PK27149.1
Cannabis sativa
PK27149.1
D
POPTR_0002s11660
Populus trichocarpa
POPTR_0002s11660
I
POPTR_0014s01390
Populus trichocarpa
POPTR_0014s01390
I