lin-31 (Caenorhabditis elegans)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 WBGene00003017 T188810_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-31
M00665_2.00		 Caenorhabditis elegans
NWRTAAAYANN
NNTRTTTAYWN		 PBM
Narasimhan et al.(2015)
pTH9116		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Foxb1
M01983_2.00 		Mus musculus
TRTTKAYWYW
WRWRTMAAYA		 PBM
Weirauch et al.(2014)
pTH2808 		0.802 0.802
FOXB1
M03028_2.00 		Homo sapiens
GAATGACACRGCKV
BMGCYGTGTCATTC		 SELEX
Jolma et al.(2013)
FOXB1_1 		0.802 0.802
FOXB1
M03029_2.00 		Homo sapiens
WRWGTMAATATTKACWYW
WRWGTMAATATTKACWYW		 SELEX
Jolma et al.(2013)
FOXB1_2 		0.802 0.802
FOXB1
M03030_2.00 		Homo sapiens
WTRTTKACWTW
WAWGTMAAYAW		 SELEX
Jolma et al.(2013)
FOXB1_3 		0.802 0.802
FOXB1
M03031_2.00 		Homo sapiens
NTRTTTACW
WGTAAAYAN		 SELEX
Jolma et al.(2013)
FOXB1_4 		0.802 0.802
FOXB1
M04837_2.00 		Homo sapiens
NWRDGYMAATATTKRCWYWD
HWRWGYMAATATTKRCHYWN		 SELEX
Yin et al.(2017)
FOXB1_eDBD_HT-SELEX 		0.802 0.802
FOXB1
M04838_2.00 		Homo sapiens
NWRNGYMAATATTKRCDYWD
HWRHGYMAATATTKRCNYWN		 SELEX
Yin et al.(2017)
FOXB1_eDBD_Methyl-HT-SELEX 		0.802 0.802
fd96Ca
M03743_2.00 		Drosophila melanogaster
WRWGYMAATATTKRCWYW
WRWGYMAATATTKRCWYW		 SELEX
Nitta et al.(2015)
fd96Ca_1 		0.794 0.791
For this family, TFs with SR scores > 0.664 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00665_2.00 Forkhead 13 102

DNA Binding Domains

Protein ID Domain From To Sequence
K10G6.1 Forkhead 13 102

Links

Other Forkhead family TFs
Other Caenorhabditis elegans TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_025_00167 Aquilegia coerulea Aquca_025_00167 I 0.000
Bo6g094990 Brassica oleracea Bo6g094990 I 0.000
Bra003969 Brassica rapa Bra003969 I 0.000
cassava4263.m1 Manihot esculenta cassava4263.m1 I 0.000
Ciclev10009011m.g Citrus clementina Ciclev10009011m.g I 0.000
Cucsa.285620 Cucumis sativus Cucsa.285620 I 0.000
Cucsa.397260 Cucumis sativus Cucsa.397260 I 0.000
F775_08891 Aegilops tauschii F775_08891 I 0.000
F775_18928 Aegilops tauschii F775_18928 I 0.000
GLYMA07G08081 Glycine max GLYMA07G08081 N 0.000
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.000
GRMZM2G176568 Zea mays GRMZM2G176568 I 0.000
GSMUA_Achr9G05930_001 Musa acuminata GSMUA_Achr9G05930_001 I 0.000
Lus10010733.g Linum usitatissimum Lus10010733.g I 0.000
MDP0000136727 Malus domestica MDP0000136727 I 0.000
mgf017789m Mimulus guttatus mgf017789m I 0.000
mgf026007m Mimulus guttatus mgf026007m I 0.000
MLOC_52982 Hordeum vulgare MLOC_52982 I 0.000
MTR_1g033620 Medicago truncatula MTR_1g033620 I 0.000
OB05G25980 Oryza brachyantha OB05G25980 I 0.000
OBART04G08050 Oryza barthii OBART04G08050 I 0.000
OBART05G18640 Oryza barthii OBART05G18640 I 0.000
orange1.1g038601m.g Citrus sinensis orange1.1g038601m.g I 0.000
Pavir.Eb00103 Panicum virgatum Pavir.Eb00103 I 0.000
Pavir.J01328 Panicum virgatum Pavir.J01328 I 0.000
Pavir.J35324 Panicum virgatum Pavir.J35324 I 0.000
Pavir.J38363 Panicum virgatum Pavir.J38363 I 0.000
PDK_20s1665441g001 Phoenix dactylifera PDK_20s1665441g001 N 0.000
PGSC0003DMG400020344 Solanum tuberosum PGSC0003DMG400020344 I 0.000
Sb03g003150 Sorghum bicolor Sb03g003150 I 0.000
Sb09g006060 Sorghum bicolor Sb09g006060 I 0.000
Sb09g030390 Sorghum bicolor Sb09g030390 I 0.000
Si022624m.g Setaria italica Si022624m.g I 0.000
Solyc02g082380.1 Solanum lycopersicum Solyc02g082380.1 I 0.000
TRAES3BF110700030CFD_g Triticum aestivum TRAES3BF110700030CFD_g I 0.000
Traes_1AL_01E24503F Triticum aestivum Traes_1AL_01E24503F I 0.000
Traes_1AL_1360F98E7 Triticum aestivum Traes_1AL_1360F98E7 N 0.000
Traes_1BL_1B12D7856 Triticum aestivum Traes_1BL_1B12D7856 I 0.000
Traes_3AL_891566958 Triticum aestivum Traes_3AL_891566958 I 0.000
Traes_3AS_794DAF12D Triticum aestivum Traes_3AS_794DAF12D I 0.000
Traes_3DS_DF23FE973 Triticum aestivum Traes_3DS_DF23FE973 I 0.000
TRIUR3_09932 Triticum urartu TRIUR3_09932 I 0.000
TRIUR3_18966 Triticum urartu TRIUR3_18966 I 0.000
VIT_04s0008g00900 Vitis vinifera VIT_04s0008g00900 I 0.000
VIT_09s0002g03540 Vitis vinifera VIT_09s0002g03540 I 0.000
VIT_09s0002g03610 Vitis vinifera VIT_09s0002g03610 I 0.000