CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.612.6.1
(
Branchiostoma floridae
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
gw.612.6.1
T189369_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN
NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.712
0.698
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.682
0.674
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.612.6.1
Forkhead
3
93
KPPYSYSCLIALAMMKSRTGNMPVTEIYSFIREHYPYFKTAPDGWKNSVRHNLSLNKCFLKIEPSQADPNRKGCLWALHPDKVDKMMSEIR
Links
Other
Forkhead
family TFs
Other
Branchiostoma floridae
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
21800_YPL128C
Saccharomyces mikatae
21800_YPL128C
I
22419_YPL128C
Saccharomyces paradoxus
22419_YPL128C
I
25381_YPL128C
Saccharomyces bayanus
25381_YPL128C
I
AACERI_AaceriACR096W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriACR096W
I
AGOS_ACR096W
Ashbya gossypii
AGOS_ACR096W
I
BN7_5968
Wickerhamomyces ciferrii
BN7_5968
I
CAGL0M02761g
Candida glabrata
CAGL0M02761g
I
CANTEDRAFT_127045
Candida tenuis
CANTEDRAFT_127045
I
CaO19.801
Candida albicans
CaO19.801
I
CaO19.8420
Candida albicans
CaO19.8420
I
CD36_18830
Candida dubliniensis
CD36_18830
I
CLUG_01092
Candida lusitaniae
CLUG_01092
I
CLUG_01092
Clavispora lusitaniae
CLUG_01092
I
CORT_0A10400
Candida orthopsilosis
CORT_0A10400
I
CPAG_00784
Candida parapsilosis
CPAG_00784
I
CTRG_01572
Candida tropicalis
CTRG_01572
I
DEHA2C16346g
Debaryomyces hansenii
DEHA2C16346g
I
e_gwh1.5.1.153.1
Pichia stipitis
e_gwh1.5.1.153.1
I
G210_0538
Candida maltosa
G210_0538
I
GNLVRS01_PISO0K21658g
Millerozyma farinosa
GNLVRS01_PISO0K21658g
I
GNLVRS01_PISO0L21659g
Millerozyma farinosa
GNLVRS01_PISO0L21659g
I
KAFR_0H02660
Kazachstania africana
KAFR_0H02660
I
KLTH0D10164g
Lachancea thermotolerans
KLTH0D10164g
I
KLTH0D10164g
Kluyveromyces thermotolerans
KLTH0D10164g
I
KNAG_0J01470
Kazachstania naganishii
KNAG_0J01470
I
Kpol_1072p42
Vanderwaltozyma polyspora
Kpol_1072p42
I
Kpol_530p11
Vanderwaltozyma polyspora
Kpol_530p11
I
Kwal_8619
Kluyveromyces waltii
Kwal_8619
I
LALA0_S10e01860g
Lachancea lanzarotensis
LALA0_S10e01860g
I
LELG_01028
Lodderomyces elongisporus
LELG_01028
I
NCAS_0C01470
Naumovozyma castellii
NCAS_0C01470
I
NDAI_0E02210
Naumovozyma dairenensis
NDAI_0E02210
I
orf19.801
Candida albicans
orf19.801
D
PAS_chr1-4_0281
Komagataella pastoris
PAS_chr1-4_0281
I
PGUG_03851
Candida guilliermondii
PGUG_03851
I
PGUG_03851
Meyerozyma guilliermondii
PGUG_03851
I
PICST_47348
Scheffersomyces stipitis
PICST_47348
I
SAKL0H07678g
Lachancea kluyveri
SAKL0H07678g
I
Scas_Contig700.45
Saccharomyces castellii
Scas_Contig700.45
I
SKUD_201904
Saccharomyces kudriavzevii
SKUD_201904
I
SPAPADRAFT_55275
Spathaspora passalidarum
SPAPADRAFT_55275
I
SU7_3534
Saccharomyces arboricola
SU7_3534
I
TBLA_0B04080
Tetrapisispora blattae
TBLA_0B04080
I
TDEL_0A05760
Torulaspora delbrueckii
TDEL_0A05760
I
TPHA_0F03170
Tetrapisispora phaffii
TPHA_0F03170
I
TPHA_0G01850
Tetrapisispora phaffii
TPHA_0G01850
I
XP_002490398.1
Pichia pastoris
XP_002490398.1
I
TBF1
Saccharomyces cerevisiae
YPL128C
D
ZBAI_00516
Zygosaccharomyces bailii
ZBAI_00516
I
ZBAI_05815
Zygosaccharomyces bailii
ZBAI_05815
I
ZYRO0F06292g
Zygosaccharomyces rouxii
ZYRO0F06292g
I