CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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A_04357
(
Schistosoma haematobium
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
A_04357
T190225_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxd1
M10570_2.00
Mus musculus
SYWAWGTAAACADHVN
NBDHTGTTTACWTWRS
Transfac
Matys et al.(2006)
V$FREAC4_01
0.811
0.849
FOXD2
M03042_2.00
Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD2_1
0.811
0.837
FOXD2
M03043_2.00
Homo sapiens
RTAAAYA
TRTTTAY
SELEX
Jolma et al.(2013)
FOXD2_2
0.811
0.837
FOXD2
M04851_2.00
Homo sapiens
HWASAATAAYAWWN
NWWTRTTATTSTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_1
0.811
0.837
FOXD2
M04852_2.00
Homo sapiens
VYWANRTAAAYAH
DTRTTTAYNTWRB
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_2
0.811
0.837
FOXD1
M02681_2.00
Homo sapiens
GTAAACAD
HTGTTTAC
SELEX
Mathelier et al.(2014)
MA0031.1
0.811
0.837
FOXD1
M10567_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FREAC4_02
0.811
0.837
FOXD2
M04853_2.00
Homo sapiens
HWACAATAACRWWN
NWWYGTTATTGTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_1
0.811
0.837
FOXD2
M04854_2.00
Homo sapiens
RYTRNGTMAACRD
HYGTTKACNYARY
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_2
0.811
0.837
FOXD3
M03044_2.00
Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD3_1
0.772
0.849
FOXD3
M03045_2.00
Homo sapiens
RTAAAYA
TRTTTAY
SELEX
Jolma et al.(2013)
FOXD3_2
0.772
0.849
FOXD3
M04855_2.00
Homo sapiens
VHWRHRTAMACW
WGTKTAYDYWDB
SELEX
Yin et al.(2017)
FOXD3_eDBD_HT-SELEX
0.772
0.849
Foxd3
M09114_2.00
Mus musculus
DVNWRDRNAAACAVN
NBTGTTTNYHYWNBH
Misc
Kulakovskiy et al.(2013)
FOXD3_MOUSE.H11MO.0.C
0.772
0.849
FOXD3
M10565_2.00
Homo sapiens
RADHAAAYAWWH
DWWTRTTTDHTY
Transfac
Matys et al.(2006)
V$FOXD3_01
0.772
0.849
FOXD3
M10566_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH2_Q5
0.772
0.849
FOXD3
M04856_2.00
Homo sapiens
VYWRHRTAAACW
WGTTTAYDYWRB
SELEX
Yin et al.(2017)
FOXD3_eDBD_Methyl-HT-SELEX
0.772
0.849
FOXD4L4
M10564_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXD4L4_01
0.766
0.802
FOXE1
M04845_2.00
Homo sapiens
BVYTAWRYAAACADN
NHTGTTTRYWTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX
0.764
0.709
FOXE1
M04846_2.00
Homo sapiens
BVYTAARYAAACAWH
DWTGTTTRYTTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX
0.764
0.709
fd59A
M03739_2.00
Drosophila melanogaster
HWAWRTAAACAWW
WWTGTTTAYWTWD
SELEX
Nitta et al.(2015)
fd59A_1
0.759
0.872
fd59A
M03740_2.00
Drosophila melanogaster
WWAVAATAACAHN
NDTGTTATTBTWW
SELEX
Nitta et al.(2015)
fd59A_2
0.759
0.872
fd59A
M03741_2.00
Drosophila melanogaster
YWRWRTAAAYAHH
DDTRTTTAYWYWR
SELEX
Nitta et al.(2015)
fd59A_3
0.759
0.872
fd59A
M03742_2.00
Drosophila melanogaster
MWACAAYAAYAHW
WDTRTTRTTGTWK
SELEX
Nitta et al.(2015)
fd59A_4
0.759
0.872
FOXL1
M03034_2.00
Homo sapiens
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
FOXL1_1
0.754
0.686
FOXL1
M03035_2.00
Homo sapiens
NRTAAAYAAAYAN
NTRTTTRTTTAYN
SELEX
Jolma et al.(2013)
FOXL1_2
0.754
0.686
FOXL1
M10558_2.00
Homo sapiens
DHNVHATAAAYAHNNN
NNNDTRTTTATDBNDH
Transfac
Matys et al.(2006)
V$FREAC7_01
0.754
0.686
Foxl1
M00164_2.00
Mus musculus
NNNRTMAAYA
TRTTKAYNNN
PBM
Badis et al.(2009)
Foxl1_2809
0.754
0.674
foxe3
M01228_2.00
Xenopus tropicalis
WNNVHHMAYW
WRTKDDBNNW
PBM
Lambert et al.(2019)
pTH9824
0.750
0.733
Gm5294
M01984_2.00
Mus musculus
NNKRTAAACANN
NNTGTTTAYMNN
PBM
Weirauch et al.(2014)
pTH3802
0.748
0.651
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA
TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.734
0.640
FOXF2
M02680_2.00
Homo sapiens
BNHNSRTAAACAHN
NDTGTTTAYSNDNV
SELEX
Mathelier et al.(2014)
MA0030.1
0.732
0.616
FOXF2
M10548_2.00
Homo sapiens
BNHNBRTAAACAHNVN
NBNDTGTTTAYVNDNV
Transfac
Matys et al.(2006)
V$FREAC2_01
0.732
0.616
FOXF1
M10529_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL5_Q3
0.724
0.628
FOXF1
M10530_2.00
Homo sapiens
YRHATAAACAHNB
VNDTGTTTATDYR
Transfac
Matys et al.(2006)
V$HFH8_01
0.724
0.628
Foxc2
M00796_2.00
Mus musculus
HNNRHMAAYA
TRTTKDYNND
PBM
Weirauch et al.(2013)
pTH3796
0.720
0.651
FOXC2
M03036_2.00
Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN
SELEX
Jolma et al.(2013)
FOXC2_1
0.720
0.651
FOXC2
M03037_2.00
Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY
SELEX
Jolma et al.(2013)
FOXC2_2
0.720
0.651
FOXC2
M03038_2.00
Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW
SELEX
Jolma et al.(2013)
FOXC2_3
0.720
0.651
FOXC2
M04841_2.00
Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1
0.720
0.651
FOXC2
M04842_2.00
Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2
0.720
0.651
FOXC2
M10559_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL14_Q2
0.720
0.651
FOXC2
M04843_2.00
Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1
0.720
0.651
FOXC2
M04844_2.00
Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2
0.720
0.651
FOXC1
M00257_2.00
Homo sapiens
NNNVHHAAYA
TRTTDDBNNN
PBM
Barrera et al.(2016)
FOXC1_REF
0.704
0.663
Foxc1
M01982_2.00
Mus musculus
HNNRHMAAYA
TRTTKDYNND
PBM
Weirauch et al.(2014)
pTH2673
0.704
0.663
FOXC1
M03013_2.00
Homo sapiens
AWRTAAAYAAAYA
TRTTTRTTTAYWT
SELEX
Jolma et al.(2013)
FOXC1_1
0.704
0.663
FOXC1
M03014_2.00
Homo sapiens
NRWMAATATTKWYN
NRWMAATATTKWYN
SELEX
Jolma et al.(2013)
FOXC1_2
0.704
0.663
FOXC1
M03015_2.00
Homo sapiens
WRWRTMAAYAW
WTRTTKAYWYW
SELEX
Jolma et al.(2013)
FOXC1_3
0.704
0.663
Foxc1
M03059_2.00
Mus musculus
RTAAAYAAACA
TGTTTRTTTAY
SELEX
Jolma et al.(2013)
Foxc1_1
0.704
0.663
Foxc1
M03060_2.00
Mus musculus
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
Foxc1_2
0.704
0.663
FOXC1
M09083_2.00
Homo sapiens
SBWAWRTAAACADHN
NDHTGTTTAYWTWVS
Misc
Kulakovskiy et al.(2013)
FOXC1_HUMAN.H11MO.0.C
0.704
0.663
Foxc1
M09111_2.00
Mus musculus
SBWAWRTAAACADHN
NDHTGTTTAYWTWVS
Misc
Kulakovskiy et al.(2013)
FOXC1_MOUSE.H11MO.0.C
0.704
0.663
FOXC1
M10525_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXC1_Q4
0.704
0.663
FOXC1
M10526_2.00
Homo sapiens
TSTTTATTTACDBNVN
NBNVHGTAAATAAASA
Transfac
Matys et al.(2006)
V$FREAC3_01
0.704
0.663
FOXC1
M00253_2.00
Homo sapiens
NNHATAAWHAN
NTDWTTATDNN
PBM
Barrera et al.(2016)
FOXC1_F112S
0.704
0.651
FOXC1
M00255_2.00
Homo sapiens
NRTATATWHNNN
NNNDWATATAYN
PBM
Barrera et al.(2016)
FOXC1_L130F
0.704
0.651
FOXC1
M00256_2.00
Homo sapiens
NNNNWWTYAMAWN
NWTKTRAWWNNNN
PBM
Barrera et al.(2016)
FOXC1_P79L
0.704
0.651
FOXC1
M00258_2.00
Homo sapiens
NNNAMAAYANN
NNTRTTKTNNN
PBM
Barrera et al.(2016)
FOXC1_S131L
0.704
0.651
FOXC1
M00259_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
PBM
Barrera et al.(2016)
FOXC1_S82T
0.704
0.651
FOXL2
M04847_2.00
Homo sapiens
NVBGHMAACAH
DTGTTKDCVBN
SELEX
Yin et al.(2017)
FOXL2_FL_HT-SELEX
0.698
0.663
Foxl2
M09112_2.00
Mus musculus
DWDWRTAAACA
TGTTTAYWHWH
Misc
Kulakovskiy et al.(2013)
FOXL2_MOUSE.H11MO.0.C
0.698
0.663
FOXL2
M10560_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q2
0.698
0.663
FOXL2
M10561_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q5
0.698
0.663
FOXL2
M04848_2.00
Homo sapiens
HVCGWMAACAH
DTGTTKWCGBD
SELEX
Yin et al.(2017)
FOXL2_FL_Methyl-HT-SELEX
0.698
0.663
FOXJ3
M03046_2.00
Homo sapiens
RTAAAVAA
TTBTTTAY
SELEX
Jolma et al.(2013)
FOXJ3_1
0.686
0.558
FOXJ3
M03047_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_2
0.686
0.558
FOXJ3
M03048_2.00
Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_3
0.686
0.558
FOXJ3
M02736_2.00
Homo sapiens
AAACAATAAACA
TGTTTATTGTTT
SELEX
Jolma et al.(2010)
FOXJ3_dimer
0.686
0.558
FOXJ3
M02737_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2010)
FOXJ3_monomer
0.686
0.558
FOXJ3
M04859_2.00
Homo sapiens
DYGTMAACAH
DTGTTKACRH
SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX
0.686
0.558
FOXJ3
M09098_2.00
Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A
0.686
0.558
FOXJ3
M04860_2.00
Homo sapiens
RYGTMAACAH
DTGTTKACRY
SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX
0.686
0.558
Foxj3
M00160_2.00
Mus musculus
NRTAAACAHN
NDTGTTTAYN
PBM
Badis et al.(2009)
Foxj3_0982
0.685
0.558
Foxj3
M01981_2.00
Mus musculus
VNHHAYANN
NNTRTDDNB
PBM
Weirauch et al.(2014)
pTH6591
0.685
0.558
Foxj3
M03055_2.00
Mus musculus
ACGGACACAAT
ATTGTGTCCGT
SELEX
Jolma et al.(2013)
Foxj3_1
0.685
0.558
Foxj3
M03056_2.00
Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
Foxj3_2
0.685
0.558
Foxj3
M03057_2.00
Mus musculus
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_3
0.685
0.558
Foxj3
M03058_2.00
Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_4
0.685
0.558
Foxj3
M09102_2.00
Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
0.685
0.558
FOXC1
M00254_2.00
Homo sapiens
RRTAAACANN
NNTGTTTAYY
PBM
Barrera et al.(2016)
FOXC1_I126M
0.680
0.651
FOXG1
M01978_2.00
Homo sapiens
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH5501
0.678
0.674
Foxg1
M00791_2.00
Mus musculus
NNNNMHAYAN
NTRTDKNNNN
PBM
Weirauch et al.(2013)
pTH2846
0.678
0.674
FOXG1
M03032_2.00
Homo sapiens
RTAAACAATDGTAAACA
TGTTTACHATTGTTTAY
SELEX
Jolma et al.(2013)
FOXG1_1
0.678
0.674
FOXG1
M03033_2.00
Homo sapiens
RCGGACACAATR
YATTGTGTCCGY
SELEX
Jolma et al.(2013)
FOXG1_2
0.678
0.674
Foxg1
M03052_2.00
Mus musculus
ATAAACAAVTGTMAACA
TGTTKACABTTGTTTAT
SELEX
Jolma et al.(2013)
Foxg1_1
0.678
0.674
Foxg1
M03053_2.00
Mus musculus
MHGGACACAATC
GATTGTGTCCDK
SELEX
Jolma et al.(2013)
Foxg1_2
0.678
0.674
Foxg1
M03054_2.00
Mus musculus
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
Foxg1_3
0.678
0.674
FOXG1
M04839_2.00
Homo sapiens
NACRYMMACAH
DTGTKKRYGTN
SELEX
Yin et al.(2017)
FOXG1_eDBD_HT-SELEX
0.678
0.674
FOXG1
M04840_2.00
Homo sapiens
HRCGYMAACAH
DTGTTKRCGYD
SELEX
Yin et al.(2017)
FOXG1_eDBD_Methyl-HT-SELEX
0.678
0.674
SPU_007644
M01987_2.00
Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN
PBM
Weirauch et al.(2014)
pTH6497
0.672
0.570
foxg1a
M01985_2.00
Oryzias latipes
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH6729
0.672
0.640
CBG14280
M01974_2.00
Caenorhabditis briggsae
RTAAACAN
NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6734
0.670
0.628
let-381
M00664_2.00
Caenorhabditis elegans
RTAAACAW
WTGTTTAY
PBM
Narasimhan et al.(2015)
pTH9057
0.670
0.465
croc
M03744_2.00
Drosophila melanogaster
WRYGTMAACAH
DTGTTKACRYW
SELEX
Nitta et al.(2015)
croc_1
0.668
0.651
croc
M10571_2.00
Drosophila melanogaster
HWNARTAAATAKNNNV
BNNNMTATTTAYYNWD
Transfac
Matys et al.(2006)
I$CROC_01
0.668
0.651
slp1
M01986_2.00
Drosophila melanogaster
NRTAAACANN
NNTGTTTAYN
PBM
Weirauch et al.(2014)
pTH6549
0.664
0.593
slp1
M03736_2.00
Drosophila melanogaster
WDYRTAAACAWW
WWTGTTTAYRHW
SELEX
Nitta et al.(2015)
slp1_1
0.664
0.593
slp1
M03737_2.00
Drosophila melanogaster
RTRTAAACAAAYADH
DHTRTTTGTTTAYAY
SELEX
Nitta et al.(2015)
slp1_2
0.664
0.593
slp1
M06474_2.00
Drosophila melanogaster
WRBVWAAACAH
DTGTTTWBVYW
B1H
Mathelier et al.(2014)
MA0458.1
0.664
0.593
slp1
M06195_2.00
Drosophila melanogaster
WRBVWAAACAH
DTGTTTWBVYW
B1H
Zhu et al.(2011)
slp1_NAR_FBgn0003430
0.664
0.593
slp1
M09669_2.00
Drosophila melanogaster
ATGTMAACAMAVV
BBTKTGTTKACAT
Misc
Kulakovskiy et al.(2009)
slp1
0.664
0.593
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
A_04357
Forkhead
195
284
KPPYSYIALITMAILHSPKRRLTLSGICDFIMSNFPYYRDRFPAWQNSIRHNLSLNDCFIKVSREPGNPGKGNYWTLDPQSEDMFDNGSF
Links
Other
Forkhead
family TFs
Other
Schistosoma haematobium
TFs
1317 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy