CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g11263
(
Romanomermis culicivorax
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
nRc.2.0.1.g11263
T190890_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.781
0.827
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.781
0.827
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.781
0.827
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.781
0.827
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.781
0.827
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.764
0.840
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.764
0.840
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.764
0.840
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.764
0.840
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.764
0.840
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.764
0.840
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.764
0.840
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.764
0.840
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.764
0.840
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.764
0.840
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.738
0.728
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA
TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.738
0.728
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.738
0.728
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.738
0.728
SPU_025010
M01988_2.00
Strongylocentrotus purpuratus
NNVNHHAYAN
NTRTDDNBNN
PBM
Weirauch et al.(2014)
pTH6641
0.667
0.407
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t11263-RA
Forkhead
59
142
RPAYTYASLIRQAILESKDRQLTLNEIYNWFQDTFSFFRRNAATWKNAVRHNLSLHKCFTRVENVKGAVWTVDEMEFYKRRPQR
Links
Other
Forkhead
family TFs
Other
Romanomermis culicivorax
TFs
363 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_09257
Capronia coronata
A1O1_09257
I
A1O3_04716
Capronia epimyces
A1O3_04716
I
A1O5_11654
Cladophialophora psammophila
A1O5_11654
I
A1O7_09038
Cladophialophora yegresii
A1O7_09038
I
A1O9_10475
Exophiala aquamarina
A1O9_10475
I
AB10510.1
Alternaria brassicicola
AB10510.1
I
ACRE_078430
Acremonium chrysogenum
ACRE_078430
I
AOL_s00054g426
Arthrobotrys oligospora
AOL_s00054g426
I
ARB_04330
Arthroderma benhamiae
ARB_04330
I
AUEXF2481DRAFT_4723
Aureobasidium subglaciale
AUEXF2481DRAFT_4723
I
BAUCODRAFT_46155
Baudoinia compniacensis
BAUCODRAFT_46155
I
BBA_09764
Beauveria bassiana
BBA_09764
I
Bcin08g06620
Botrytis cinerea
Bcin08g06620
I
BDDG_01924
Blastomyces dermatitidis
BDDG_01924
I
BGHDH14_bgh05455
Blumeria graminis
BGHDH14_bgh05455
I
ACLA_049440
Aspergillus clavatus
CADACLAG00004607
I
CADAFLAG00002000
Aspergillus flavus
CADAFLAG00002000
I
AFUA_4G10220
Aspergillus fumigatus
CADAFUAG00008139
I
CADANGAG00004383
Aspergillus niger
CADANGAG00004383
I
ANIA_02009
Aspergillus nidulans
CADANIAG00008677
I
CADAORAG00001740
Aspergillus oryzae
CADAORAG00001740
I
ATEG_00707
Aspergillus terreus
CADATEAG00006049
I
NFIA_105830
Neosartorya fischeri
CADNFIAG00009642
I
CCM_01917
Cordyceps militaris
CCM_01917
I
CFIO01_08636
Colletotrichum fioriniae
CFIO01_08636
I
CGGC5_8911
Colletotrichum gloeosporioides
CGGC5_8911
I
CH063_09099
Colletotrichum higginsianum
CH063_09099
I
CHGG_07578
Chaetomium globosum
CHGG_07578
I
CIMG_09071
Coccidioides immitis
CIMG_09071
I
CMQ_7465
Grosmannia clavigera
CMQ_7465
I
Cob_09008
Colletotrichum orbiculare
Cob_09008
I
COCC4DRAFT_145536
Bipolaris maydis
COCC4DRAFT_145536
I
COCCADRAFT_98536
Bipolaris zeicola
COCCADRAFT_98536
I
COCMIDRAFT_97398
Bipolaris oryzae
COCMIDRAFT_97398
I
COCSADRAFT_316172
Bipolaris sorokiniana
COCSADRAFT_316172
I
COCVIDRAFT_35595
Bipolaris victoriae
COCVIDRAFT_35595
I
CPC735_015080
Coccidioides posadasii
CPC735_015080
I
CPUR_02900
Claviceps purpurea
CPUR_02900
I
CSUB01_05911
Colletotrichum sublineola
CSUB01_05911
I
CTHT_0069620
Chaetomium thermophilum
CTHT_0069620
I
DOTSEDRAFT_69441
Dothistroma septosporum
DOTSEDRAFT_69441
I
DRE_02305
Drechslerella stenobrocha
DRE_02305
I
EPUS_00532
Endocarpon pusillum
EPUS_00532
I
estExt_fgenesh1_pm.C_11052
Cryphonectria parasitica
estExt_fgenesh1_pm.C_11052
I
estExt_fgenesh2_pg.C_10368
Neurospora discreta
estExt_fgenesh2_pg.C_10368
I
estExt_Genewise1.C_230428
Cochliobolus heterostrophus C5
estExt_Genewise1.C_230428
I
estExt_Genewise1Plus.C_20760
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_20760
I
estExt_Genewise1Plus.C_chr_20819
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_20819
I
EURHEDRAFT_33024
Aspergillus ruber
EURHEDRAFT_33024
I
EV44_g5529
Erysiphe necator
EV44_g5529
I
e_gw1.17.43.1
Nectria haematococca
e_gw1.17.43.1
I
F503_08379
Ophiostoma piceae uamh
F503_08379
I
FFUJ_08943
Fusarium fujikuroi
FFUJ_08943
I
FGRRES_09019
Fusarium graminearum
FGRRES_09019
I
FPSE_07078
Fusarium pseudograminearum
FPSE_07078
I
G647_07996
Cladophialophora carrionii
G647_07996
I
GGTG_14272
Gaeumannomyces graminis
GGTG_14272
I
GLRG_04843
Colletotrichum graminicola
GLRG_04843
I
GMDG_01699
Pseudogymnoascus destructans
GMDG_01699
I
H072_3561
Dactylellina haptotyla
H072_3561
I
H101_04135
Trichophyton interdigitale
H101_04135
I
H102_02623
Trichophyton rubrum
H102_02623
I
H105_02641
Trichophyton soudanense
H105_02641
I
HCBG_07805
Histoplasma capsulatum
HCBG_07805
I
HMPREF1120_01387
Exophiala dermatitidis
HMPREF1120_01387
I
HMPREF1541_09773
Cyphellophora europaea
HMPREF1541_09773
I
HMPREF1624_02616
Sporothrix schenckii
HMPREF1624_02616
I
LEMA_P109350.1
Leptosphaeria maculans
LEMA_P109350.1
I
M437DRAFT_17573
Aureobasidium melanogenum
M437DRAFT_17573
I
M438DRAFT_337107
Aureobasidium pullulans
M438DRAFT_337107
I
M7I_3672
Glarea lozoyensis
M7I_3672
I
MAC_07310
Metarhizium acridum
MAC_07310
I
MAJ_09430
Metarhizium majus
MAJ_09430
I
MAM_07140
Metarhizium album
MAM_07140
I
MANI_005260
Metarhizium anisopliae
MANI_005260
I
MAPG_09605
Magnaporthe poae
MAPG_09605
I
MBM_01133
Marssonina brunnea
MBM_01133
I
MBR_09861
Metarhizium brunneum
MBR_09861
I
MCYG_05206
Microsporum canis
MCYG_05206
I
MCYG_05206
Arthroderma otae
MCYG_05206
I
MGG_04853
Magnaporthe oryzae
MGG_04853
I
MGU_07058
Metarhizium guizhouense
MGU_07058
I
MGYG_06249
Microsporum gypseum
MGYG_06249
I
MPH_05440
Macrophomina phaseolina
MPH_05440
I
MYCFIDRAFT_108409
Pseudocercospora fijiensis
MYCFIDRAFT_108409
I
Mycgr3G68153
Zymoseptoria tritici
Mycgr3G68153
I
MYCTH_2301643
Myceliophthora thermophila
MYCTH_2301643
I
kal-1
Neurospora crassa
NCU03593
D
NechaG46180
Fusarium solani
NechaG46180
I
NEUTE1DRAFT_116070
Neurospora tetrasperma
NEUTE1DRAFT_116070
I
OCS_03121
Ophiocordyceps sinensis
OCS_03121
I
OIDMADRAFT_115588
Oidiodendron maius
OIDMADRAFT_115588
I
PAAG_08226
Paracoccidioides sp lutzii
PAAG_08226
I
PABG_03432
Paracoccidioides brasiliensis
PABG_03432
I
Pc22g12610
Penicillium chrysogenum
Pc22g12610
I
PCH_Pc22g12610
Penicillium rubens
PCH_Pc22g12610
I
PDE_03945
Penicillium oxalicum
PDE_03945
I
PDIP_25010
Penicillium digitatum
PDIP_25010
I
PEX1_092370
Penicillium expansum
PEX1_092370
I
PFICI_09611
Pestalotiopsis fici
PFICI_09611
I
PITC_045370
Penicillium italicum
PITC_045370
I
PMAA_096690
Talaromyces marneffei
PMAA_096690
I
PMAA_096690
Penicillium marneffei
PMAA_096690
I
PODANS_2_6460
Podospora anserina
PODANS_2_6460
I
PTRG_06001
Pyrenophora triticirepentis
PTRG_06001
I
PTT_08847
Pyrenophora teres
PTT_08847
I
PV04_09430
Capronia semiimmersa
PV04_09430
I
PV05_00128
Exophiala xenobiotica
PV05_00128
I
PV06_08621
Exophiala oligosperma
PV06_08621
I
PV08_02081
Exophiala spinifera
PV08_02081
I
PV09_05176
Verruconis gallopava
PV09_05176
I
PV10_04527
Exophiala mesophila
PV10_04527
I
PV11_03368
Exophiala sideris
PV11_03368
I
PVAR5_4295
Byssochlamys spectabilis
PVAR5_4295
I
S40285_02237
Stachybotrys chlorohalonata
S40285_02237
I
S40288_03762
Stachybotrys chartarum
S40288_03762
I
SAPIO_CDS8330
Scedosporium apiospermum
SAPIO_CDS8330
I
SBOR_4438
Sclerotinia borealis
SBOR_4438
I
SEPMUDRAFT_147420
Sphaerulina musiva
SEPMUDRAFT_147420
I
SETTUDRAFT_88112
Setosphaeria turcica
SETTUDRAFT_88112
I
SMAC_03124
Sordaria macrospora
SMAC_03124
I
SNOG_16027
Stagonospora nodorum
SNOG_16027
I
SNOG_16027
Phaeosphaeria nodorum
SNOG_16027
I
SPBR_02439
Sporothrix brasiliensis
SPBR_02439
I
TEQG_04675
Trichophyton equinum
TEQG_04675
I
TESG_03886
Trichophyton tonsurans
TESG_03886
I
THITE_70031
Thielavia terrestris
THITE_70031
I
TRIATDRAFT_229262
Trichoderma atroviride
TRIATDRAFT_229262
I
TRIREDRAFT_77154
Trichoderma reesei
TRIREDRAFT_77154
I
TRIVIDRAFT_36050
Trichoderma virens
TRIVIDRAFT_36050
I
TRV_05560
Trichophyton verrucosum
TRV_05560
I
TSTA_044650
Talaromyces stipitatus
TSTA_044650
I
U727_00430330251
Penicillium solitum
U727_00430330251
I
UCREL1_10957
Eutypa lata
UCREL1_10957
I
UCRNP2_645
Neofusicoccum parvum
UCRNP2_645
I
UCRPA7_6974
Togninia minima
UCRPA7_6974
I
UREG_03315
Uncinocarpus reesii
UREG_03315
I
UV8b_1861
Ustilaginoidea virens
UV8b_1861
I
V499_08137
Pseudogymnoascus pannorum
V499_08137
I
VDAG_05070
Verticillium dahliae
VDAG_05070
I
VDBG_06534
Verticillium albo atrum
VDBG_06534
I
VDBG_06534
Verticillium alfalfae
VDBG_06534
I
VHEMI08470
Torrubiella hemipterigena
VHEMI08470
I
W97_08853
Coniosporium apollinis
W97_08853
I
X797_009738
Metarhizium robertsii
X797_009738
I
YALI0_A18469g
Yarrowia lipolytica
YALI0_A18469g
I
Z517_01632
Fonsecaea pedrosoi
Z517_01632
I
Z518_03392
Rhinocladiella mackenziei
Z518_03392
I
Z519_08645
Cladophialophora bantiana
Z519_08645
I