CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0001179001
(
Schistosoma rodhaini
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
SROB_0001179001
T191140_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXF2
M02680_2.00
Homo sapiens
BNHNSRTAAACAHN
NDTGTTTAYSNDNV
SELEX
Mathelier et al.(2014)
MA0030.1
0.713
0.827
FOXF2
M10548_2.00
Homo sapiens
BNHNBRTAAACAHNVN
NBNDTGTTTAYVNDNV
Transfac
Matys et al.(2006)
V$FREAC2_01
0.713
0.827
FOXF1
M10529_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL5_Q3
0.691
0.813
FOXF1
M10530_2.00
Homo sapiens
YRHATAAACAHNB
VNDTGTTTATDYR
Transfac
Matys et al.(2006)
V$HFH8_01
0.691
0.813
bin
M03752_2.00
Drosophila melanogaster
HTAATGTAAACAAW
WTTGTTTACATTAD
SELEX
Nitta et al.(2015)
bin_1
0.665
0.667
bin
M06199_2.00
Drosophila melanogaster
TAAACARVGA
TCBYTGTTTA
B1H
Zhu et al.(2011)
bin_FlyReg_FBgn0045759
0.665
0.667
bin
M06200_2.00
Drosophila melanogaster
RTAAACA
TGTTTAY
B1H
Zhu et al.(2011)
bin_SANGER_5_FBgn0045759
0.665
0.667
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001179001-mRNA-1
Forkhead
1
79
MAIKASPSKRCTLSEIYQYLHTQFPFFRGQYTGWKNSVRHNLSLNEVFIKLPKGMGRPGKGHYWTIDPAAEFMFQDGAS
Links
Other
Forkhead
family TFs
Other
Schistosoma rodhaini
TFs
202 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL003602
Aedes aegypti
AAEL003602
N
AALB005765
Anopheles albimanus
AALB005765
N
AARA007771
Anopheles arabiensis
AARA007771
N
AATE006171
Anopheles atroparvus
AATE006171
N
ACEP12467
Atta cephalotes
ACEP12467
N
ACHR001790
Anopheles christyi
ACHR001790
N
ACUA006984
Anopheles culicifacies
ACUA006984
N
ACYPI007962
Acyrthosiphon pisum
ACYPI007962
N
ADIR008055
Anopheles dirus
ADIR008055
N
AEPI001699
Anopheles epiroticus
AEPI001699
N
AFAF012484
Anopheles farauti
AFAF012484
N
AFUN008026
Anopheles funestus
AFUN008026
N
AGAP007109
Anopheles gambiae
AGAP007109
N
AMAM024265
Anopheles maculatus
AMAM024265
N
AMEC009079
Anopheles melas
AMEC009079
N
AMEC019433
Anopheles melas
AMEC019433
N
AMEM014597
Anopheles merus
AMEM014597
N
AMIN011248
Anopheles minimus
AMIN011248
N
AQUA002036
Anopheles quadriannulatus
AQUA002036
N
ASIS021384
Anopheles sinensis
ASIS021384
N
ASTEI06883
Anopheles stephensi
ASTEI06883
N
BGIBMGA012741
Bombyx mori
BGIBMGA012741
N
CapteG221467
Capitella teleta
CapteG221467
N
Cflo_02233--XP_001120809.1_APIME
Camponotus floridanus
Cflo_02233--XP_001120809.1_APIME
N
CLEC010738
Cimex lectularius
CLEC010738
N
CPIJ004963
Culex quinquefasciatus
CPIJ004963
N
CpipJ_CPIJ004963
Culex pipiens
CpipJ_CPIJ004963
N
DAPPUDRAFT_28712
Daphnia pulex
DAPPUDRAFT_28712
N
ENSGMOG00000016370
Gadus morhua
ENSGMOG00000016370
N
CG13287
Drosophila melanogaster
FBgn0035643
N
GA12173
Drosophila pseudoobscura
FBgn0072221
N
GF23998
Drosophila ananassae
FBgn0100992
N
GG15296
Drosophila erecta
FBgn0107548
N
GH14523
Drosophila grimshawi
FBgn0121999
N
GH25273
Drosophila grimshawi
FBgn0132728
N
GI13299
Drosophila mojavensis
FBgn0136056
N
GL21034
Drosophila persimilis
FBgn0158629
N
GM14727
Drosophila sechellia
FBgn0169648
N
GD13907
Drosophila simulans
FBgn0185603
N
GJ12068
Drosophila virilis
FBgn0199320
N
GE21517
Drosophila yakuba
FBgn0238774
N
fgenesh2_pg.scaffold_282000018
Branchiostoma floridae
fgenesh2_pg.scaffold_282000018
N
GB51047
Apis mellifera
GB51047
N
HHAL003310-PA
Halyomorpha halys
HHAL003310-PA
N
HMEL017852
Heliconius melpomene
HMEL017852
N
Hsal_04139--XP_001120809.1_APIME
Harpegnathos saltator
Hsal_04139--XP_001120809.1_APIME
N
ISCW009928
Ixodes scapularis
ISCW009928
N
KGM_11907
Danaus plexippus
KGM_11907
N
L798_05037
Zootermopsis nevadensis
L798_05037
N
LCUP008185
Lucilia cuprina
LCUP008185
N
LDEC001191
Leptinotarsa decemlineata
LDEC001191
N
LotgiG69958
Lottia gigantea
LotgiG69958
N
MCINX010301
Melitaea cinxia
MCINX010301
N
MDOA007546
Musca domestica
MDOA007546
N
NV17890
Nasonia vitripennis
NV17890
N
Ocbimv22006527m.g
Octopus bimaculoides
Ocbimv22006527m.g
N
PHUM271650
Pediculus humanus
PHUM271650
N
PPAI006396
Phlebotomus papatasi
PPAI006396
N
SINV25005
Solenopsis invicta
SINV25005
N
SMAR006435
Strigamia maritima
SMAR006435
N
TC013073
Tribolium castaneum
TC013073
N
tetur11g03890
Tetranychus urticae
tetur11g03890
N