AMTR_s00148p00049970 (Amborella trichopoda)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 AMTR_s00148p00049970 T191686_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.857 0.889
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.857 0.889
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.848 0.833
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.848 0.833
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.847 0.833
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.847 0.833
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.847 0.833
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.847 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.837 0.889
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.834 0.806
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.833 0.778
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.832 0.861
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.832 0.806
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.832 0.806
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.832 0.806
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN08370 GATA 154 189

Links

Other GATA family TFs
Other Amborella trichopoda TFs

612 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_009170 Acremonium chrysogenum ACRE_009170 I
ARB_01185 Arthroderma benhamiae ARB_01185 N
BBA_00740 Beauveria bassiana BBA_00740 I
Bcin02g05460 Botrytis cinerea Bcin02g05460 I
BDDG_03436 Blastomyces dermatitidis BDDG_03436 N
ACLA_037430 Aspergillus clavatus CADACLAG00003256 N
AFUA_3G09670 Aspergillus fumigatus CADAFUAG00004963 N
CADANGAG00012801 Aspergillus niger CADANGAG00012801 N
ANIA_03075 Aspergillus nidulans CADANIAG00010003 N
CADAORAG00003168 Aspergillus oryzae CADAORAG00003168 N
ATEG_04481 Aspergillus terreus CADATEAG00009053 N
NFIA_067630 Neosartorya fischeri CADNFIAG00006385 N
CCM_05966 Cordyceps militaris CCM_05966 I
CFIO01_08325 Colletotrichum fioriniae CFIO01_08325 I
CGGC5_10678 Colletotrichum gloeosporioides CGGC5_10678 I
CH063_10224 Colletotrichum higginsianum CH063_10224 I
CIMG_01913 Coccidioides immitis CIMG_01913 N
CMQ_3768 Grosmannia clavigera CMQ_3768 I
Cob_01903 Colletotrichum orbiculare Cob_01903 I
CPC735_046040 Coccidioides posadasii CPC735_046040 N
CSUB01_08919 Colletotrichum sublineola CSUB01_08919 I
EURHEDRAFT_375153 Aspergillus ruber EURHEDRAFT_375153 N
F503_03706 Ophiostoma piceae uamh F503_03706 I
FFUJ_08392 Fusarium fujikuroi FFUJ_08392 I
fgenesh1_pm.00168_#_210 Aspergillus carbonarius fgenesh1_pm.00168_#_210 N
fgenesh1_pm.sca_12_chr5_2_0000158 Nectria haematococca fgenesh1_pm.sca_12_chr5_2_0000158 I
FGRRES_17514 Fusarium graminearum FGRRES_17514 I
FPSE_08858 Fusarium pseudograminearum FPSE_08858 I
GGTG_02446 Gaeumannomyces graminis GGTG_02446 I
GLRG_09279 Colletotrichum graminicola GLRG_09279 I
GMDG_05510 Pseudogymnoascus destructans GMDG_05510 I
GMDG_06850 Pseudogymnoascus destructans GMDG_06850 I
GSTUM_00003233001 Tuber melanosporum GSTUM_00003233001 N
GSTUM_00008124001 Tuber melanosporum GSTUM_00008124001 N
H101_05235 Trichophyton interdigitale H101_05235 N
H102_08372 Trichophyton rubrum H102_08372 N
H105_08399 Trichophyton soudanense H105_08399 N
HCBG_02521 Histoplasma capsulatum HCBG_02521 N
HMPREF1624_04642 Sporothrix schenckii HMPREF1624_04642 I
M7I_1858 Glarea lozoyensis M7I_1858 I
MANI_011716 Metarhizium anisopliae MANI_011716 I
MAPG_09501 Magnaporthe poae MAPG_09501 I
MBM_07119 Marssonina brunnea MBM_07119 N
MBR_04909 Metarhizium brunneum MBR_04909 I
MCYG_03418 Microsporum canis MCYG_03418 N
MCYG_03418 Arthroderma otae MCYG_03418 N
MGU_01761 Metarhizium guizhouense MGU_01761 I
MGYG_00581 Microsporum gypseum MGYG_00581 N
MPH_00135 Macrophomina phaseolina MPH_00135 N
NechaG93341 Fusarium solani NechaG93341 I
OCS_02179 Ophiocordyceps sinensis OCS_02179 I
PABG_07523 Paracoccidioides brasiliensis PABG_07523 N
Pc12g15860 Penicillium chrysogenum Pc12g15860 N
PCH_Pc12g15860 Penicillium rubens PCH_Pc12g15860 N
PDE_04982 Penicillium oxalicum PDE_04982 N
PDIP_76170 Penicillium digitatum PDIP_76170 N
PEX1_096620 Penicillium expansum PEX1_096620 N
PFICI_14476 Pestalotiopsis fici PFICI_14476 I
PITC_015280 Penicillium italicum PITC_015280 N
PMAA_045840 Penicillium marneffei PMAA_045840 N
PMAA_045840 Talaromyces marneffei PMAA_045840 N
PV04_04067 Capronia semiimmersa PV04_04067 N
PVAR5_5474 Byssochlamys spectabilis PVAR5_5474 N
S40285_04496 Stachybotrys chlorohalonata S40285_04496 I
S40288_04125 Stachybotrys chartarum S40288_04125 I
SAPIO_CDS3835 Scedosporium apiospermum SAPIO_CDS3835 I
TEQG_00925 Trichophyton equinum TEQG_00925 N
TESG_06256 Trichophyton tonsurans TESG_06256 N
TRIATDRAFT_37495 Trichoderma atroviride TRIATDRAFT_37495 I
TRIREDRAFT_51907 Trichoderma reesei TRIREDRAFT_51907 I
TRIVIDRAFT_114564 Trichoderma virens TRIVIDRAFT_114564 I
TRV_03240 Trichophyton verrucosum TRV_03240 N
TSTA_035080 Talaromyces stipitatus TSTA_035080 N
U727_00431251121 Penicillium solitum U727_00431251121 N
UCRNP2_2614 Neofusicoccum parvum UCRNP2_2614 N
UCRPA7_5598 Togninia minima UCRPA7_5598 I
UREG_06856 Uncinocarpus reesii UREG_06856 N
UV8b_6210 Ustilaginoidea virens UV8b_6210 I
VDAG_09925 Verticillium dahliae VDAG_09925 I
VHEMI08584 Torrubiella hemipterigena VHEMI08584 I
W97_03128 Coniosporium apollinis W97_03128 N
X797_001395 Metarhizium robertsii X797_001395 I