Bo1g055120 (Brassica oleracea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bo1g055120 T191872_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.823 0.806
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.803 0.806
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.803 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g055120.1 GATA 40 75

Links

Other GATA family TFs
Other Brassica oleracea TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_020500 Aspergillus clavatus CADACLAG00002437 N 0.000
CADAFLAG00001260 Aspergillus flavus CADAFLAG00001260 N 0.000
AFUA_1G14860 Aspergillus fumigatus CADAFUAG00006932 N 0.000
CADANGAG00001296 Aspergillus niger CADANGAG00001296 N 0.000
CADANGAG00005237 Aspergillus niger CADANGAG00005237 N 0.000
ANIA_00825 Aspergillus nidulans CADANIAG00001835 N 0.000
CADAORAG00003140 Aspergillus oryzae CADAORAG00003140 N 0.000
NFIA_010560 Neosartorya fischeri CADNFIAG00001625 N 0.000
EURHEDRAFT_512345 Aspergillus ruber EURHEDRAFT_512345 N 0.000
e_gw1.00042.343.1 Aspergillus carbonarius e_gw1.00042.343.1 N 0.000
PMAA_074100 Talaromyces marneffei PMAA_074100 N 0.000
PMAA_074100 Penicillium marneffei PMAA_074100 N 0.000
PVAR5_1431 Byssochlamys spectabilis PVAR5_1431 N 0.000
TSTA_094640 Talaromyces stipitatus TSTA_094640 N 0.000