Bo5g103560 (Brassica oleracea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bo5g103560 T191895_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.856 0.944
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.847 0.889
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.847 0.889
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.847 0.833
ZIM
M06892_2.00 		Arabidopsis thaliana
AWYSRACGGYYVWGA
TCWBRRCCGTYSRWT		 Dap-seq
OMalley et al.(2016)
ZIM_col_a 		0.810 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g103560.1 GATA 210 247

Links

Other GATA family TFs
Other Brassica oleracea TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL018175 Aedes aegypti AAEL018175 N
AALB005154 Anopheles albimanus AALB005154 N
AARA008073 Anopheles arabiensis AARA008073 N
AATE010620 Anopheles atroparvus AATE010620 N
ACEP10253 Atta cephalotes ACEP10253 N
ACHR007846 Anopheles christyi ACHR007846 N
ACOM025729 Anopheles coluzzii ACOM025729 N
ACUA011324 Anopheles culicifacies ACUA011324 N
ADAC007302 Anopheles darlingi ADAC007302 N
ADIR007209 Anopheles dirus ADIR007209 N
AEPI009163 Anopheles epiroticus AEPI009163 N
AFAF000142 Anopheles farauti AFAF000142 N
AFUN009303 Anopheles funestus AFUN009303 N
AGAP007503 Anopheles gambiae AGAP007503 N
AMEC020556 Anopheles melas AMEC020556 N
AMEM007399 Anopheles merus AMEM007399 N
AMIN010420 Anopheles minimus AMIN010420 N
AQUA004418 Anopheles quadriannulatus AQUA004418 N
ASIS022980 Anopheles sinensis ASIS022980 N
ASTEI01417 Anopheles stephensi ASTEI01417 N
BGIBMGA004976 Bombyx mori BGIBMGA004976 N
Cflo_10168--XP_001121257.1_APIME Camponotus floridanus Cflo_10168--XP_001121257.1_APIME N
CLEC003538 Cimex lectularius CLEC003538 N
CPIJ008611 Culex quinquefasciatus CPIJ008611 N
CpipJ_CPIJ008611 Culex pipiens CpipJ_CPIJ008611 N
GA20228 Drosophila pseudoobscura FBgn0080223 N
CG34422 Drosophila melanogaster FBgn0085451 N
GF19054 Drosophila ananassae FBgn0096066 N
GG19191 Drosophila erecta FBgn0111397 N
GH17861 Drosophila grimshawi FBgn0125330 N
GI21731 Drosophila mojavensis FBgn0144461 N
GM18723 Drosophila sechellia FBgn0173628 N
GM18724 Drosophila sechellia FBgn0173629 N
GD17413 Drosophila simulans FBgn0188968 N
GJ19112 Drosophila virilis FBgn0206257 N
GK19784 Drosophila willistoni FBgn0221782 N
GB42021 Apis mellifera GB42021 N
HMEL004731 Heliconius melpomene HMEL004731 N
Hsal_12949--XP_001121257.1_APIME Harpegnathos saltator Hsal_12949--XP_001121257.1_APIME N
KGM_17418 Danaus plexippus KGM_17418 N
L798_03938 Zootermopsis nevadensis L798_03938 N
LCUP006788 Lucilia cuprina LCUP006788 N
LLOJ005741 Lutzomyia longipalpis LLOJ005741 N
M378DRAFT_479088 Amanita muscaria M378DRAFT_479088 N
MCINX003187 Melitaea cinxia MCINX003187 N
MDOA004758 Musca domestica MDOA004758 N
NV11270 Nasonia vitripennis NV11270 N
PPAI006116 Phlebotomus papatasi PPAI006116 N
SINV17602 Solenopsis invicta SINV17602 N
TC008693 Tribolium castaneum TC008693 N
YQE_05996 Dendroctonus ponderosae YQE_05996 N