CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCSADRAFT_101039
(
Bipolaris sorokiniana
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
COCSADRAFT_101039
T192339_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.856
0.972
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMD59710
GATA
390
425
CTDCGTLDSPEWRKGPNGPKTLCNACGLRWAKKEKK
Links
Other
GATA
family TFs
Other
Bipolaris sorokiniana
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB010552
Biomphalaria glabrata
BGLB010552
I
HMEL005683
Heliconius melpomene
HMEL005683
N
RPRC013473
Rhodnius prolixus
RPRC013473
I