CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPC735_060480
(
Coccidioides posadasii
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CPC735_060480
T192368_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.847
0.889
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EER24678
GATA
437
472
CHSCNRSETPEWRRGPDGARTLCNACGLHFAKLSRK
Links
Other
GATA
family TFs
Other
Coccidioides posadasii
TFs
201 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000011179
Astyanax mexicanus
ENSAMXG00000011179
N
znf704
Danio rerio
ENSDARG00000061718
N
ZNF704
Oryctolagus cuniculus
ENSOCUG00000016504
N
ENSONIG00000002630
Oreochromis niloticus
ENSONIG00000002630
N
ZNF704
Oryzias latipes
ENSORLG00000012970
N
ENSPFOG00000014291
Poecilia formosa
ENSPFOG00000014291
N
ENSTNIG00000017782
Tetraodon nigroviridis
ENSTNIG00000017782
N
znf704
Takifugu rubripes
ENSTRUG00000014603
N
ENSXMAG00000003607
Xiphophorus maculatus
ENSXMAG00000003607
N