CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F775_19309
(
Aegilops tauschii
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
F775_19309
T193188_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA27
M02005_2.00
Arabidopsis thaliana
NNGATBNNN
NNNVATCNN
PBM
Weirauch et al.(2014)
pTH7492
0.827
0.871
GATA26
M02001_2.00
Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN
PBM
Weirauch et al.(2014)
pTH7490
0.827
0.839
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMT27370
GATA
48
78
FKGTPLWRNGPPHKPVLCNACGSRWRTKGSL
Links
Other
GATA
family TFs
Other
Aegilops tauschii
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G145041
Zea mays
GRMZM2G145041
I
0.000
GRMZM2G421256
Zea mays
GRMZM2G421256
N
0.000
Lus10012602.g
Linum usitatissimum
Lus10012602.g
N
0.000
MDP0000201300
Malus domestica
MDP0000201300
N
0.000
MDP0000281062
Malus domestica
MDP0000281062
N
0.000
OBART08G03430
Oryza barthii
OBART08G03430
N
0.000
OGLUM08G03510
Oryza glumaepatula
OGLUM08G03510
I
0.000
ORUFI08G03840
Oryza rufipogon
ORUFI08G03840
N
0.000
PDK_20s1433691g001
Phoenix dactylifera
PDK_20s1433691g001
N
0.000
TCM_013400
Theobroma cacao
TCM_013400
I
0.000
Traes_6AL_1144FC823
Triticum aestivum
Traes_6AL_1144FC823
N
0.000