CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLTH0A03036g
(
Lachancea thermotolerans
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
KLTH0A03036g
T193844_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GZF3
M00051_2.00
Saccharomyces cerevisiae
HGATAAGN
NCTTATCD
PBM
Badis et al.(2008)
GZF3_2167
0.851
0.743
GZF3
M01548_2.00
Saccharomyces cerevisiae
NNGATWNN
NNWATCNN
PBM
Zhu et al.(2009)
Gzf3
0.851
0.743
GZF3
M07480_2.00
Saccharomyces cerevisiae
HGATAASN
NSTTATCD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0309.1
0.851
0.743
GZF3
M08562_2.00
Saccharomyces cerevisiae
GATAAG
CTTATC
Misc
DeBoer et al.(2011)
YJL110C_593
0.851
0.743
DAL80
M00052_2.00
Saccharomyces cerevisiae
NNNNTANNNN
NNNNTANNNN
PBM
Badis et al.(2008)
DAL80_2083
0.851
0.714
DAL80
M07481_2.00
Saccharomyces cerevisiae
YGATAAG
CTTATCR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0289.1
0.851
0.714
DAL80
M08564_2.00
Saccharomyces cerevisiae
VNMGATAD
HTATCKNB
Misc
DeBoer et al.(2011)
YKR034W_1355
0.851
0.714
GAT1
M00049_2.00
Saccharomyces cerevisiae
NNNNGATANN
NNTATCNNNN
PBM
Badis et al.(2008)
GAT1_2166
0.837
0.800
GAT1
M01546_2.00
Saccharomyces cerevisiae
NNGATWNN
NNWATCNN
PBM
Zhu et al.(2009)
Gat1
0.837
0.800
GAT1
M07478_2.00
Saccharomyces cerevisiae
NHGATAAG
CTTATCDN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0300.1
0.837
0.800
GAT1
M08560_2.00
Saccharomyces cerevisiae
WKTGATWW
WWATCAMW
Misc
DeBoer et al.(2011)
YFL021W_962
0.837
0.800
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAR21147
GATA
461
495
CTNCHTKTTPLWRRDPQGNPLCNACGLFLKLHGVV
Links
Other
GATA
family TFs
Other
Lachancea thermotolerans
TFs
376 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACHR008952
Anopheles christyi
ACHR008952
I
AEPI008594
Anopheles epiroticus
AEPI008594
I
ALUE_0001723601
Ascaris lumbricoides
ALUE_0001723601
N
Bm8223
Brugia malayi
Bm8223
N
CPIJ013490
Culex quinquefasciatus
CPIJ013490
I
CpipJ_CPIJ013490
Culex pipiens
CpipJ_CPIJ013490
I
D918_02241
Trichuris suis
D918_02241
I
EEL_0000264201
Elaeophora elaphi
EEL_0000264201
N
tead1b
Danio rerio
ENSDARG00000059483
I
Tead3
Dipodomys ordii
ENSDORG00000010798
I
TEAD3
Microcebus murinus
ENSMICG00000000029
I
TEAD1
Microcebus murinus
ENSMICG00000007178
I
TEAD3
Macaca mulatta
ENSMMUG00000015909
I
TEAD3
Pan troglodytes
ENSPTRG00000018086
I
ENSSHAG00000015930
Sarcophilus harrisii
ENSSHAG00000015930
I
e_gw.291.69.1
Branchiostoma floridae
e_gw.291.69.1
I
nAv.1.0.1.g09844
Acanthocheilonema viteae
nAv.1.0.1.g09844
N
nDi.2.2.2.g03142
Dirofilaria immitis
nDi.2.2.2.g03142
N
nOo.2.0.1.g04457
Onchocerca ochengi
nOo.2.0.1.g04457
N
OFLC_0000413601
Onchocerca flexuosa
OFLC_0000413601
N
PPAI001408
Phlebotomus papatasi
PPAI001408
I