MTR_1g094930 (Medicago truncatula)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 MTR_1g094930 T194189_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.867 0.972
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.848 0.944
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.847 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.847 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.847 0.833
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.847 0.806
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.847 0.806
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.843 0.833
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.843 0.833
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.843 0.833
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.843 0.833
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.832 0.806
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.832 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.823 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.823 0.806
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.778
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.750
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES62141 GATA 244 279
AES62142 GATA 149 184

Links

Other GATA family TFs
Other Medicago truncatula TFs

614 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_009830 Acremonium chrysogenum ACRE_009830 N
CADAFLAG00010199 Aspergillus flavus CADAFLAG00010199 N
CANTEDRAFT_115466 Candida tenuis CANTEDRAFT_115466 N
CaO19.13413 Candida albicans CaO19.13413 N
CaO19.5992 Candida albicans CaO19.5992 N
CD36_85150 Candida dubliniensis CD36_85150 N
CLUG_01645 Candida lusitaniae CLUG_01645 N
CLUG_01645 Clavispora lusitaniae CLUG_01645 N
COCC4DRAFT_72641 Bipolaris maydis COCC4DRAFT_72641 N
COCCADRAFT_83231 Bipolaris zeicola COCCADRAFT_83231 N
COCSADRAFT_171845 Bipolaris sorokiniana COCSADRAFT_171845 N
COCVIDRAFT_33636 Bipolaris victoriae COCVIDRAFT_33636 N
CORT_0C04810 Candida orthopsilosis CORT_0C04810 N
CTRG_02521 Candida tropicalis CTRG_02521 N
DEHA2E17842g Debaryomyces hansenii DEHA2E17842g N
estExt_Genewise1.C_10564 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10564 N
fgenesh1_pg.00021_#_7 Aspergillus carbonarius fgenesh1_pg.00021_#_7 N
G210_4588 Candida maltosa G210_4588 N
GNLVRS01_PISO0G16308g Millerozyma farinosa GNLVRS01_PISO0G16308g N
GNLVRS01_PISO0H16309g Millerozyma farinosa GNLVRS01_PISO0H16309g N
KUCA_T00002773001 Kuraishia capsulata KUCA_T00002773001 I
LELG_02863 Lodderomyces elongisporus LELG_02863 N
MAC_02136 Metarhizium acridum MAC_02136 N
PAS_chr1-4_0290 Komagataella pastoris PAS_chr1-4_0290 N
PGUG_01274 Candida guilliermondii PGUG_01274 N
PGUG_01274 Meyerozyma guilliermondii PGUG_01274 N
SPAPADRAFT_61965 Spathaspora passalidarum SPAPADRAFT_61965 N
XP_002490409.1 Pichia pastoris XP_002490409.1 N