POPTR_0005s02040 (Populus trichocarpa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 POPTR_0005s02040 T194881_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.838 0.806
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.818 0.806
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.818 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s02040.1 GATA 26 61

Links

Other GATA family TFs
Other Populus trichocarpa TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_03477 Capronia coronata A1O1_03477 N
AB02376.1 Alternaria brassicicola AB02376.1 N
AUEXF2481DRAFT_43258 Aureobasidium subglaciale AUEXF2481DRAFT_43258 N
BAUCODRAFT_76471 Baudoinia compniacensis BAUCODRAFT_76471 N
Bcin15g03690 Botrytis cinerea Bcin15g03690 N
ANIA_07050 Aspergillus nidulans CADANIAG00000421 N
ATEG_02243 Aspergillus terreus CADATEAG00000116 N
CFIO01_10413 Colletotrichum fioriniae CFIO01_10413 N
CIMG_08688 Coccidioides immitis CIMG_08688 N
COCC4DRAFT_48711 Bipolaris maydis COCC4DRAFT_48711 N
COCCADRAFT_28209 Bipolaris zeicola COCCADRAFT_28209 N
COCMIDRAFT_98604 Bipolaris oryzae COCMIDRAFT_98604 N
COCSADRAFT_191370 Bipolaris sorokiniana COCSADRAFT_191370 N
COCVIDRAFT_38655 Bipolaris victoriae COCVIDRAFT_38655 N
CPC735_062800 Coccidioides posadasii CPC735_062800 N
DOTSEDRAFT_71663 Dothistroma septosporum DOTSEDRAFT_71663 N
EPUS_03180 Endocarpon pusillum EPUS_03180 N
estExt_Genewise1.C_32092 Cryphonectria parasitica estExt_Genewise1.C_32092 N
estExt_Genewise1Plus.C_30389 Neurospora discreta estExt_Genewise1Plus.C_30389 N
estExt_Genewise1Plus.C_590020 Mycosphaerella fijiensis estExt_Genewise1Plus.C_590020 N
estExt_Genewise1Plus.C_sca_82_chr10_2_00666 Nectria haematococca estExt_Genewise1Plus.C_sca_82_chr10_2_00666 N
EURHEDRAFT_416477 Aspergillus ruber EURHEDRAFT_416477 N
EV44_g4401 Erysiphe necator EV44_g4401 N
e_gw1.3.1055.1 Cochliobolus heterostrophus C5 e_gw1.3.1055.1 N
fgenesh1_pg.C_chr_4000614 Mycosphaerella graminicola fgenesh1_pg.C_chr_4000614 N
fgenesh1_pm.00795_#_71 Aspergillus carbonarius fgenesh1_pm.00795_#_71 N
FGRRES_01936 Fusarium graminearum FGRRES_01936 N
FOXG_04196 Fusarium oxysporum FOXG_04196 N
GGTG_08792 Gaeumannomyces graminis GGTG_08792 N
GMDG_07239 Pseudogymnoascus destructans GMDG_07239 N
H102_02999 Trichophyton rubrum H102_02999 N
H105_03019 Trichophyton soudanense H105_03019 N
HMPREF1120_07037 Exophiala dermatitidis HMPREF1120_07037 N
KLTH0E08778g Kluyveromyces thermotolerans KLTH0E08778g N
KLTH0E08778g Lachancea thermotolerans KLTH0E08778g N
KUCA_T00003965001 Kuraishia capsulata KUCA_T00003965001 N
Kwal_17681 Kluyveromyces waltii Kwal_17681 N
M437DRAFT_75522 Aureobasidium melanogenum M437DRAFT_75522 N
M438DRAFT_357635 Aureobasidium pullulans M438DRAFT_357635 N
MAPG_05005 Magnaporthe poae MAPG_05005 N
MGG_01836 Magnaporthe oryzae MGG_01836 N
MYCFIDRAFT_61348 Pseudocercospora fijiensis MYCFIDRAFT_61348 N
Mycgr3G92834 Zymoseptoria tritici Mycgr3G92834 N
MYCTH_2298696 Myceliophthora thermophila MYCTH_2298696 N
NCU08000 Neurospora crassa NCU08000 N
NechaG72345 Fusarium solani NechaG72345 N
PAAG_08396 Paracoccidioides sp lutzii PAAG_08396 N
PABG_07803 Paracoccidioides brasiliensis PABG_07803 N
PDE_04503 Penicillium oxalicum PDE_04503 N
PV04_05931 Capronia semiimmersa PV04_05931 N
PV05_04616 Exophiala xenobiotica PV05_04616 N
PV06_01443 Exophiala oligosperma PV06_01443 N
PV07_04335 Cladophialophora immunda PV07_04335 N
PV08_00049 Exophiala spinifera PV08_00049 N
PV09_03090 Verruconis gallopava PV09_03090 N
PV10_07497 Exophiala mesophila PV10_07497 N
PV11_00147 Exophiala sideris PV11_00147 N
SEPMUDRAFT_148866 Sphaerulina musiva SEPMUDRAFT_148866 N
SNOG_12765 Stagonospora nodorum SNOG_12765 N
THITE_2115093 Thielavia terrestris THITE_2115093 N
TRIATDRAFT_238142 Trichoderma atroviride TRIATDRAFT_238142 N
TRIREDRAFT_52841 Trichoderma reesei TRIREDRAFT_52841 N
TRIVIDRAFT_223962 Trichoderma virens TRIVIDRAFT_223962 N
UREG_02672 Uncinocarpus reesii UREG_02672 N
V499_05441 Pseudogymnoascus pannorum V499_05441 N
VHEMI00485 Torrubiella hemipterigena VHEMI00485 N
YALI0_D12628g Yarrowia lipolytica YALI0_D12628g N
Z518_08246 Rhinocladiella mackenziei Z518_08246 N
Z519_07768 Cladophialophora bantiana Z519_07768 N