CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PTRG_04513
(
Pyrenophora triticirepentis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PTRG_04513
T194951_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.856
0.972
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDU47420
GATA
409
444
CTDCGTLDSPEWRKGPNGPKTLCNACGLRWAKKEKK
Links
Other
GATA
family TFs
Other
Pyrenophora triticirepentis
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCBG_04126
Histoplasma capsulatum
HCBG_04126
I
0.823
MELLADRAFT_91797
Melampsora laricipopulina
MELLADRAFT_91797
N
0.000
PGTG_04061
Puccinia graminis
PGTG_04061
N
0.000