CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV07_05919
(
Cladophialophora immunda
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PV07_05919
T194999_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.861
0.917
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW30150
GATA
413
448
CHSCNRAETPEWRRGPDGARTLCNACGLHYAKLTRK
Links
Other
GATA
family TFs
Other
Cladophialophora immunda
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M422DRAFT_252964
Sphaerobolus stellatus
M422DRAFT_252964
N
M422DRAFT_253772
Sphaerobolus stellatus
M422DRAFT_253772
N
M422DRAFT_256037
Sphaerobolus stellatus
M422DRAFT_256037
N
M422DRAFT_266884
Sphaerobolus stellatus
M422DRAFT_266884
N
M422DRAFT_270008
Sphaerobolus stellatus
M422DRAFT_270008
N