CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc09g075610.2
(
Solanum lycopersicum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
Solyc09g075610.2
T195311_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc09g075610.2.1
GATA
4
39
CSYCHTTTTPLWRSGPSGPKSLCNACGIKYNKKRRQ
Links
Other
GATA
family TFs
Other
Solanum lycopersicum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA013867
Oryza indica
BGIOSGA013867
I
0.808
BGIOSGA013869
Oryza indica
BGIOSGA013869
I
0.808
F775_43556
Aegilops tauschii
F775_43556
I
0.808
LPERR03G33900
Leersia perrieri
LPERR03G33900
I
0.808
MDP0000309902
Malus domestica
MDP0000309902
I
0.805
mgf022078m
Mimulus guttatus
mgf022078m
I
0.822
OBART03G39750
Oryza barthii
OBART03G39750
I
0.808
OGLUM03G39650
Oryza glumaepatula
OGLUM03G39650
I
0.808
OLONG_023900
Oryza longistaminata
OLONG_023900
I
0.808
OMERI03G36600
Oryza meridionalis
OMERI03G36600
I
0.808
ONIVA03G41600
Oryza nivara
ONIVA03G41600
I
0.808
OPUNC03G36900
Oryza punctata
OPUNC03G36900
I
0.808
OPUNC03G36910
Oryza punctata
OPUNC03G36910
I
0.808
ORUFI03G41540
Oryza rufipogon
ORUFI03G41540
I
0.808
OS03G0831200
Oryza sativa
OS03G0831200
I
0.808
PGSC0003DMG400024783
Solanum tuberosum
PGSC0003DMG400024783
I
0.835
PGSC0003DMG400031828
Solanum tuberosum
PGSC0003DMG400031828
N
0.867
PK21934.1
Cannabis sativa
PK21934.1
I
0.810
Solyc01g100220.2
Solanum lycopersicum
Solyc01g100220.2
I
0.835
Traes_5BL_F258582BB
Triticum aestivum
Traes_5BL_F258582BB
I
0.808