CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SS1G_08523
(
Sclerotinia sclerotiorum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
SS1G_08523
T195366_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sre
M01237_2.00
Neurospora crassa
NHGATHWN
NWDATCDN
PBM
Lambert et al.(2019)
pTH11832
0.854
0.942
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDN92660
GATA
116
149
CSNCGTTRTPLWRRSPQGATICNACGLYQKARNA
EDN92660
GATA
275
309
CQNCGTTITPLWRRDESGHTICNACGLYYKLHGVH
Links
Other
GATA
family TFs
Other
Sclerotinia sclerotiorum
TFs
135 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bcin06g03110
Botrytis cinerea
Bcin06g03110
N
CGGC5_6429
Colletotrichum gloeosporioides
CGGC5_6429
N
CTHT_0067420
Chaetomium thermophilum
CTHT_0067420
N
estExt_Genewise1Plus.C_40765
Neurospora discreta
estExt_Genewise1Plus.C_40765
N
EV44_g1725
Erysiphe necator
EV44_g1725
N
F503_06317
Ophiostoma piceae uamh
F503_06317
N
GLRG_04435
Colletotrichum graminicola
GLRG_04435
N
GMDG_06933
Pseudogymnoascus destructans
GMDG_06933
N
GSTUM_00004693001
Tuber melanosporum
GSTUM_00004693001
N
HMPREF1541_05019
Cyphellophora europaea
HMPREF1541_05019
N
HMPREF1624_06130
Sporothrix schenckii
HMPREF1624_06130
N
MAPG_06586
Magnaporthe poae
MAPG_06586
N
MYCTH_2296022
Myceliophthora thermophila
MYCTH_2296022
N
NCU09214
Neurospora crassa
NCU09214
N
NEUTE1DRAFT_71839
Neurospora tetrasperma
NEUTE1DRAFT_71839
N
OIDMADRAFT_178173
Oidiodendron maius
OIDMADRAFT_178173
N
PODANS_1_10660
Podospora anserina
PODANS_1_10660
N
PV06_00042
Exophiala oligosperma
PV06_00042
N
PV08_04487
Exophiala spinifera
PV08_04487
N
SBOR_3762
Sclerotinia borealis
SBOR_3762
N
SMAC_00394
Sordaria macrospora
SMAC_00394
N
SS1G_02851
Sclerotinia sclerotiorum
SS1G_02851
N
THITE_2113722
Thielavia terrestris
THITE_2113722
N
V499_01449
Pseudogymnoascus pannorum
V499_01449
N
VDAG_08764
Verticillium dahliae
VDAG_08764
N
W97_05488
Coniosporium apollinis
W97_05488
N