CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm004389
(
Prunus mume
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Pm004389
T195951_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm004389
GATA
207
244
CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTL
Links
Other
GATA
family TFs
Other
Prunus mume
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_18732
Aegilops tauschii
F775_18732
N
MLOC_37013
Hordeum vulgare
MLOC_37013
N
Traes_2BS_74269A4C5
Triticum aestivum
Traes_2BS_74269A4C5
N
Traes_3B_224A6B7E5
Triticum aestivum
Traes_3B_224A6B7E5
N
Traes_6AS_29B3E9858
Triticum aestivum
Traes_6AS_29B3E9858
N
Traes_6AS_480364CD5
Triticum aestivum
Traes_6AS_480364CD5
N
Traes_6BS_A8901EA1F
Triticum aestivum
Traes_6BS_A8901EA1F
N
TRIUR3_26522
Triticum urartu
TRIUR3_26522
N